Gene detail

Detailed information of ANN35688-RA in Leptoseris scabra

Genomic Location: Scaffold_1433__1_contigs__length_27361:20184...21821
NR annotation: WP_166340349.1, alpha-glucosidase family protein [Pseudoalteromonas sp. MB47]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Z3R8	Probable alpha-glucosidase OS=Rhizobium meliloti (strain 1021) OX=266834 GN=aglA PE=3 SV=2
Q45101	Oligo-1,6-glucosidase OS=Heyndrickxia coagulans OX=1398 GN=malL PE=3 SV=1
P29094	Oligo-1,6-glucosidase OS=Parageobacillus thermoglucosidasius OX=1426 GN=malL PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003117 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00128 all species →	Alpha-amylase	Alpha amylase, catalytic domain	Domain	Interproscan
PF16657 all species →	Malt_amylase_C	Maltogenic Amylase, C-terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006047 all species →	Domain	Glycosyl hydrolase, family 13, catalytic domain	Interproscan
IPR013780 all species →	Homologous_superfamily	Glycosyl hydrolase, all-beta	Interproscan
IPR032091 all species →	Domain	Maltogenic Amylase, C-terminal	Interproscan
IPR017853 all species →	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR045857 all species →	Homologous_superfamily	Oligo-1,6-glucosidase, domain 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10357 all species →	ALPHA-AMYLASE FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0004556 all species →	Molecular Function	alpha-amylase activity	Interproscan
GO:0009313 all species →	Biological Process	oligosaccharide catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01187	malZ; alpha-glucosidase	EC:3.2.1.20	Starch and sucrose metabolism	ko00500	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.