Gene detail

Detailed information of ANN35986-RA in Montipora grisea

Genomic Location: Scaffold_2824__1_contigs__length_39874:36174...38266
NR annotation: SUS07535.1, Pyruvate dehydrogenase E1 component subunit alpha [uncultured Defluviicoccus sp.]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN35986-RA

ATGGTCACTACTACTACGCAACCCGACACCGTCCGCGCGTCCGGTGCCGCTGCCGCCGGCCTTGCCGGCACGCTGCCGCGCGAGCTGCTGATGATGATGTACGAACGGATGACGTTGATCCGGGCGTTCGAGGAACGGCTGGTCGACCTGATGGCAAAGGGAGCCGCGATCGGCGTCGCCCATTCCTACGCCGGCCAGGAGGCGGTAGCCGTCGGCGTTTGCAGTGCACTGAACCGCAACGACTGGATCGCCTCGACCCACCGCGGCCACGGTCACTGCCTTGCCAAGGGGATGGAGGTAAACCCCGTAATGGCAGAGATCTACGGCAAGGTGGACGGGGCCAACCGGGGTAAGGGGGGCTCGATGCACATTACCGACGTCGGCGTCGGTATGCTCGGCGTAAACCCGATTGTCGGCGGTGGCATTCCGCACGCGGTGGGAGCGGCACTGTCCGCCAAGCTGCGCAACACCGGGCAGGTGGCGGCGACCTTCTTCGGCGACGGCGGCGCCAACATCGGTGCGTGCCACGAGTCGATCAACCTTGCGACGGTGTGGAACGTTCCCTGCGTGTTCGTGTGCGAGAACAACGGGTATGCGCAGAGCACCCCCTCCGAATGGAGCACCGCCGGCGAGATCTGGAAGCGGGCGATCGGTTACGGCATTCCCGGTGAGCCGGTCGACGGCCAGGACGTGCTCGCGGTGTATGCCGCGGTGAAGAAAGCGGTCGACCGCGCCCGCGCCGGCGGCGGCCCGTCACTGATCGAAGCCAGAACCTATCGCTACCACGGGCACTACATCGGCGACGATCCGCATAATTATCGACTGGCTCGGGAAGAGGACGAAGCGCGTGCGCGCGACTGCATTCAGCGCCTGCGGGCGAACCTGCTGGCCGCGCAAACGGCTGCCGCGTCCGCGTTGGACCGTCTGGAAGAGCGCGCCGCGCAGCGTATCGACGCGGCGGTGGCATTCGCGGAGGCAGCGCCCTTTCCGCAGCCGGGCGAGCTGACCACGCAGGCGGTCGGCCAGGCGATCCGGCAGGAGATGCAACGGGATCCGAGTGTCGTGGTGATCGGCGAGGACGTGGCCGGCGCCGCCGGGCGCGCGCATCTCGGGCTGCAGGACGCATGGGGCGGACCGACCCGGTCGACGCGCGGCCTGGTGCTGGACTTCGGTCCGGAGCGGGTGATCGACGCGCCAATTTCGGAGATGGGGTTCACCGGCGCCGCGGTGGGAGCGGCGATGACCGGATTACGGCCGATCGTGGACCTCGGATTCGTCGATCTGATCGCCTGCTGCTACGATCAGGTGATCAACCAGGCGGCCAAGATGCACTACATGATGGGCGGCCAGGTGGCGATTCCCATGACGATGCGGATGGCGTACGGGGCGCGTCCGCCAAGCGGGCAATCACTGGGCGGCGGGGCCGCTGCCCAGCATTCCCAATCGCTGTACGCGGTCGTGGCACACGTACCCGGTCTGAAGGTGGTGGTGCCGACCGATGCGTACAACGCCAAGGGGTTGCTGACGGCCGCCATTCGTGACGACAACCCGGTAGTCGTATTCGAGAATCGCTACCTGGGAGTCGCCGCCCATGCGCAGGTTCCCGAGGAGCCCTACACCCTGCCGCTGGGCAAGGCGCGCATCGCGCGCGCGGGTAGCGACGTCACGCTGTGCGGCATCGGACGCATGACCTACGTCTGTCTCGAGGCCGCCGGGCAGTTGACGGCCGACGGTCTGCGCGCGGAGGTGGTCGACCTGCTGAGCGTGGCGCCGATCGACGAAGAAACCGTACTGGAGTCGGTTTCGCGCACCCACCGTCTGGTGGTGGTGGATGAGGACACCCCGACCTGCTCGGCCGGGCGCGACGTTGCCGCGCGGGTGGCGGACGCCGGGTTCGATTACCTCGATGCGCCGGTCAAGACCGTGCACAGCGCGGACGTGCCGGTGCCCTACAGCGCCGCGCTCGAGTCGCTGTATACGCCGAACGCCGGGCAGGTGGTCGCCACCGTGCGTGAACTGCTCGGCCATGGCGCCTGA

Transcript

ANN35986-RA

Protein

Uniprot

Uniprot term	Description
O34591	Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Bacillus subtilis (strain 168) OX=224308 GN=acoB PE=3 SV=3
O31404	Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha OS=Bacillus subtilis (strain 168) OX=224308 GN=acoA PE=2 SV=2
P27746	Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) OX=381666 GN=acoB PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02779	Transket_pyr	Transketolase, pyrimidine binding domain	Domain	Interproscan
PF02780	Transketolase_C	Transketolase, C-terminal domain	Domain	Interproscan
PF00676	E1_dh	Dehydrogenase E1 component	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005475	Domain	Transketolase-like, pyrimidine-binding domain	Interproscan
IPR051467	Family	Pyruvate Dehydrogenase E1 Beta Subunit	Interproscan
IPR033248	Domain	Transketolase, C-terminal domain	Interproscan
IPR009014	Homologous_superfamily	Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II	Interproscan
IPR001017	Domain	Dehydrogenase, E1 component	Interproscan
IPR029061	Homologous_superfamily	Thiamin diphosphate-binding fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43257	PYRUVATE DEHYDROGENASE E1 COMPONENT BETA SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0016624	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11381	bkdA; 2-oxoisovalerate dehydrogenase E1 component	EC:1.2.4.4	Lipoic acid metabolism	ko00785	deepkoala