Detailed information of ANN36088-RA in Montipora grisea

Genomic Location: Scaffold_6805__1_contigs__length_26229:21267...22316
NR annotation: MCE2522544.1, microcin C ABC transporter permease YejB [Paracoccaceae bacterium]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A9CKL3Peptidoglycan transport system permease protein YejB OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=yejB PE=3 SV=1
P0AFU1Inner membrane ABC transporter permease protein YejB OS=Escherichia coli O157:H7 OX=83334 GN=yejB PE=3 SV=1
P0AFU0Inner membrane ABC transporter permease protein YejB OS=Escherichia coli (strain K12) OX=83333 GN=yejB PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0233896 (this species only)

 Pfam domain
No Pfam domain signature was detected for ANN36088-RA. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR000515
all species →
DomainABC transporter type 1, transmembrane domain MetI-likeInterproscan
IPR035906
all species →
Homologous_superfamilyMetI-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30465
all species →
INNER MEMBRANE ABC TRANSPORTERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0055085
all species →
Biological Processtransmembrane transportInterproscan
GO:0042884
all species →
Biological Processmicrocin transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN36088-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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