Gene detail

Detailed information of ANN36092-RA in Montipora grisea

Genomic Location: Scaffold_2987__1_contigs__length_38793:30091...31194
NR annotation: MCP4079983.1, FHA domain-containing protein [Planctomycetaceae bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P27713	Nif-specific regulatory protein OS=Herbaspirillum seropedicae OX=964 GN=nifA PE=4 SV=1
D5ARW9	Nif-specific regulatory protein OS=Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) OX=272942 GN=nifA1 PE=4 SV=1
P0CY94	Nif-specific regulatory protein OS=Rhodobacter capsulatus OX=1061 GN=nifA1 PE=4 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00158	Sigma54_activat	Sigma-54 interaction domain	Domain	Interproscan
PF01590	GAF	GAF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002078	Domain	RNA polymerase sigma factor 54 interaction domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR003018	Domain	GAF domain	Interproscan
IPR025662	Binding_site	Sigma-54 interaction domain, ATP-binding site 1	Interproscan
IPR025943	Binding_site	Sigma-54 interaction domain, ATP-binding site 2	Interproscan
IPR029016	Homologous_superfamily	GAF-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32071	TRANSCRIPTIONAL REGULATORY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02584	nifA; Nif-specific regulatory protein	-	Transcription factors	ko03000	deepkoala