Gene detail

Detailed information of ANN36103-RA in Montipora grisea

Genomic Location: Scaffold_2972__1_contigs__length_38897:1443...2747
NR annotation: MCK6590538.1, sigma-54-dependent Fis family transcriptional regulator [Polyangiaceae bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P27713	Nif-specific regulatory protein OS=Herbaspirillum seropedicae OX=964 GN=nifA PE=4 SV=1
Q06065	Regulatory protein AtoC OS=Escherichia coli (strain K12) OX=83333 GN=atoC PE=1 SV=2
P14375	Transcriptional regulatory protein ZraR OS=Escherichia coli (strain K12) OX=83333 GN=zraR PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00158	Sigma54_activat	Sigma-54 interaction domain	Domain	Interproscan
PF13185	GAF_2	GAF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR002078	Domain	RNA polymerase sigma factor 54 interaction domain	Interproscan
IPR003018	Domain	GAF domain	Interproscan
IPR025662	Binding_site	Sigma-54 interaction domain, ATP-binding site 1	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR029016	Homologous_superfamily	GAF-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32071	TRANSCRIPTIONAL REGULATORY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan