Detailed information of ANN36244-RA in Montipora grisea

Genomic Location: Scaffold_1674__1_contigs__length_51381:41230...42184
NR annotation: XP_019850714.1, PREDICTED: RING finger protein nhl-1-like [Amphimedon queenslandica]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004952 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08450
all species →		SGLSMP-30/Gluconolactonase/LRE-like regionRepeatInterproscan
PF01436
all species →		NHLNHL repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001258
all species →		RepeatNHL repeatInterproscan
IPR013658
all species →		DomainSMP-30/Gluconolactonase/LRE-like regionInterproscan
IPR011042
all species →		Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR050952
all species →		FamilyTripartite Motif and NHL Repeat Containing E3 LigasesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24104
all species →		E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01053gnl, RGN; gluconolactonaseEC:3.1.1.17
Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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