Gene detail

Detailed information of ANN36283-RA in Montipora grisea

Genomic Location: Scaffold_8243__1_contigs__length_23044:11480...14435
NR annotation: WP_273054068.1, isoleucine--tRNA ligase [Hyphomonas adhaerens]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN36283-RA

ATGGCTGATACAACCCAGACTCCGACCGATAAACGCGATTATCGCGAAACCCTTTTCCTGCCCAAAACCGACTTTCCGATGCGGGGCGGCCTGCCCAAGGCTGAACCGAAATGGATCGAGCATTGGGATGGCATGAAGCTCTACGAGAAGCTCCGTGTGGACGCCAAGTCACGCGGCGCGAAACCTTGGTTGCTGCATGATGGCCCGCCTTATGCAAACGGCCATATCCACCTTGGGACAGCGATGAACAAGATCGTCAAGGATGTAATTGTGCGTAGCCGCCAGATGGCTGGGTATGATGCGTCCTATGTCCCCGGATGGGATTGTCACGGGCTTCCGATTGAGTGGAAGGTCGAAGAAGAGTTCCGCTCAAAGGGGCGGACCAAGGATGATGTGACCCCGGGCGAATTCCGGGCGCGCTGCCGGGAATATGCTCAGGGATGGGTTGATGTTCAGGCGAAGGAATTCCGTAGCCTGGGTGTCGAAGGCGAGTGGGACAATCCTTATCTGACAATGCGTCCCGAATCTGAGGCCCGGATTGTCAGCGAGTTCCTGACCATTGCGATGGGGGGGCGACTCGTACGCGGGGCAAAGCCGGTTATGTGGAGCCCGGTTGAGAAGACTGCGCTGGCGGAAGCTGAAGTCGAATATTTTGATCGGAAAGTGCCGGTTATCTGGGTGAAGTTTCCAGTTGGTGGCGAGGGTGACCTTGCTGATGCTGCGGTCGTGATCTGGACCACCACCCCCTGGACCATCCCGGCTAATCAGGCCATCGCCTATAATCCGGCCATTGATTATGCTGTCTTTGAAGTCACCGATGTGATGACCGAAGAAGAGCTCGGCTTCGCGCCTTATGTGGCCGCAGGAGATAAGCTCATTCTGGCAGAAGCTCTGGCGGTGAGGTTATGGCTGCCGCTAAGGCGCGTAGCTTTGAGAAGATCAGTAACTGCGGCAGAGCTTTCAGCTCTTGCGCCTGCTCACCCACTTGCCGGCAATGAGTTCTGGAGCGCGCCGCGCCCGATGCTGGCTGGCGATCATGTTACTGCAGACGCAGGTACGGGATTTGTCCATACAGCGCCGGCACATGGTGAAGATGACTTCAATGTCTGGGTTGAGGCTGGCCACACCACACGGGATATTCGCCAGATCGTTGATGACGCAGGCTGCTACACAGTCGATGTTCCTTATTTCGCCGGGCTCGATATCATCCGGACATCAGGCAAGAAACGCGGCGAGCAGGGCAAAGCCAATGCCGAAGTGATGAAGGTGCTTGCTGAAAGCGGCAATTTGCTGTCCCGCGGGCTGACCAATATTCGCGACGCACATTCCTGGCGGTCCAAGGCACCGGTAATCCGCGGGCGACGCCGCAATGGTTCATTGCGATGGATAAGCCAGGATGGCAAGACCCTGCGTGAGCTGGCTATGGCTGGTCTCGAGCAGACGGAGTTCTTCCCGGCGTCCGGGCGTAACCGGCTGACATCAATGGTTGAAGGGCGCCCTGACTGGCTGGTGTCCCGCCAGCGTAACTGGGGTGTGCCGCTGACCATCTTTGTCAACGAGCTGGGCCAGCCTCACACGGCAGCTCTCAGTGAAGATGCAGCCAGCGCGATCAATAAGCGTATTATCGATGCGGTCTCCAGAGGCGGTGTTGAAGCATGGTTTGATACTGACAGTGCCGAATTCCTTGGTGACGAAGGTGGTGATCAGGAGTGGACGAAAGTTACCGATGTTCTGGACGTCTGGTTCGATAGCGGCACGACTCACGCCTTCTGTCTGCGAGAACGCGGCATTATCGACGACGCAACTGGCCAGGCTGATCTCTATATGGAGGGATCTGACCAGCACCGTGGATGGTTCCAGTCCTCCCTTCTCGAATCGTGCGCGACACGCGGGCTGCCGCCATATCGCCAGATCCTCACGCATGGCTTCATTGTCGATGCGGACGGCAAGAAGATGTCTAAGTCGCTCGGCAATACGGTTGAGCCATCTCAGATTGCCAAGAAATATGGCATTGAAATCCTGAGGATCTGGACAGCTTCTACGGACTATACAGAAGACCTTCGCATCTCTGAGGAGATCCTGAAAGGATCGGTTGAGACCTACCGCCGGCTGCGGAACACATTACGATATCTTCTGGGCGCGCTGGACGGTTATTCTTCTGATGATGCTGTTGCTCATGAAGAGATGCCCGGTCTGGAGCGGTGGGTTCTGCACCGATTGACAGAACTCGATGAAACTATTCGATCTGCCTATCATGTTTATGATTTTAAACGGGCGATGTCAGCACTGGTCAATTTTTGCGCTGTCGACCTCTCAGCCGTTTACTTTGATATCCGTAAAGACAGCCTCTATTGCGATGCACCCGATGAGCTGCGTCGACGGGCGGCACGAACGGTTATGGACCTCGTGCTTGAGCGCCTGCTTGCCTGGCTGGCGCCGATTCTTGTTTTCACCACAGAAGAAGCCTTTAGCCACAGCCGTTTCTCTGGCGCGGCAGAAAGTGTTCATCTTCTGCAATTCCCGGTAACACCAACTGCATGGCGCGATGCTGCTCTGGCCGATAAATGGTCGGGTATCTTCGATGTCCGGCGTGTTGTGACGGGGGCGCTCGAAATCGAGCGGCGCGAAAAGCGGATCGGGTCCTCGCTTGAAGCGGCACCGAGCGTTTACATCACCTCTGAGCAGCTACTCTCTGACGTTAAGGCAGAGACACCTGCCGACCTTTTCATCACTTCAGATGTTAAGCTTGTTCGCGGAGATGGTCCGGGCGGCTCTTTTACACTGGATGATGTGGAAGGGGTTGCTGTCGTGCCGGCGAAGGCTGACGGCGTTAAGTGTGAACGCAGCTGGAAGTATTTCGATCCGGCAACGGCACGTACAGGCTATCCTGATATTACACCGCGAGATGCTGATGCGGTCGAAAAATGGCAAGCGATGCAAGGCTAA

Transcript

ANN36283-RA

Protein

Uniprot

Uniprot term	Description
Q9AAA5	Isoleucine--tRNA ligase OS=Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15) OX=190650 GN=ileS PE=3 SV=1
P0C124	Isoleucine--tRNA ligase OS=Brucella abortus (strain 2308) OX=359391 GN=ileS PE=3 SV=1
P0C123	Isoleucine--tRNA ligase OS=Brucella abortus biovar 1 (strain 9-941) OX=262698 GN=ileS PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08264	Anticodon_1	Anticodon-binding domain of tRNA ligase	Domain	Interproscan
PF00133	tRNA-synt_1	tRNA synthetases class I (I, L, M and V)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009080	Homologous_superfamily	Aminoacyl-tRNA synthetase, class Ia, anticodon-binding	Interproscan
IPR033708	Domain	Isoleucyl tRNA synthetase type 1, anticodon-binding domain	Interproscan
IPR013155	Domain	Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding	Interproscan
IPR023585	Family	Isoleucine-tRNA ligase, type 1	Interproscan
IPR002301	Family	Isoleucine-tRNA ligase	Interproscan
IPR009008	Homologous_superfamily	Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain	Interproscan
IPR050081	Family	Isoleucine--tRNA ligase	Interproscan
IPR001412	Conserved_site	Aminoacyl-tRNA synthetase, class I, conserved site	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR002300	Domain	Aminoacyl-tRNA synthetase, class Ia	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42765	SOLEUCYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006418	Biological Process	tRNA aminoacylation for protein translation	Interproscan
GO:0000049	Molecular Function	tRNA binding	Interproscan
GO:0004822	Molecular Function	isoleucine-tRNA ligase activity	Interproscan
GO:0006428	Biological Process	isoleucyl-tRNA aminoacylation	Interproscan
GO:0002161	Molecular Function	aminoacyl-tRNA editing activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01870	IARS, ileS; isoleucyl-tRNA synthetase	EC:6.1.1.5	Transfer RNA biogenesis	ko03016	deepkoala