Gene detail

Detailed information of ANN36361-RA in Montipora grisea

Genomic Location: Scaffold_724__1_contigs__length_77168:65375...67173
NR annotation: MBP7494627.1, translation elongation factor 4 [Spirochaetales bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P60794	Elongation factor 4 OS=Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104) OX=243275 GN=lepA PE=3 SV=1
Q0SP76	Elongation factor 4 OS=Borreliella afzelii (strain PKo) OX=390236 GN=lepA PE=3 SV=1
O51115	Elongation factor 4 OS=Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31) OX=224326 GN=lepA PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002510 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06421 all species →	LepA_C	GTP-binding protein LepA C-terminus	Family	Interproscan
PF00679 all species →	EFG_C	Elongation factor G C-terminus	Domain	Interproscan
PF14492 all species →	EFG_III	Elongation Factor G, domain III	Domain	Interproscan
PF00009 all species →	GTP_EFTU	Elongation factor Tu GTP binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000795 all species →	Domain	Translational (tr)-type GTP-binding domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR009000 all species →	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan
IPR013842 all species →	Domain	GTP-binding protein LepA, C-terminal	Interproscan
IPR038363 all species →	Homologous_superfamily	LepA, C-terminal domain superfamily	Interproscan
IPR035647 all species →	Homologous_superfamily	EF-G domain III/V-like	Interproscan
IPR006297 all species →	Family	Elongation factor 4	Interproscan
IPR000640 all species →	Domain	Elongation factor EFG, domain V-like	Interproscan
IPR035654 all species →	Domain	Elongation factor 4, domain IV	Interproscan
IPR041095 all species →	Domain	Elongation Factor G, domain II	Interproscan
IPR005225 all species →	Domain	Small GTP-binding protein domain	Interproscan
IPR031157 all species →	Conserved_site	Tr-type G domain, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43512 all species →	TRANSLATION FACTOR GUF1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0043022 all species →	Molecular Function	ribosome binding	Interproscan
GO:0045727 all species →	Biological Process	positive regulation of translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03596	lepA; GTP-binding protein LepA	-	Legionellosis	ko05134	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.