Gene detail

Detailed information of ANN36485-RA in Montipora grisea

Genomic Location: Scaffold_6902__1_contigs__length_26045:18495...20160
NR annotation: WP_092842287.1, choline dehydrogenase [Roseovarius lutimaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q6LGH5	Oxygen-dependent choline dehydrogenase OS=Photobacterium profundum (strain SS9) OX=298386 GN=betA PE=3 SV=1
Q985M5	Oxygen-dependent choline dehydrogenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=betA PE=3 SV=1
A6X2G7	Oxygen-dependent choline dehydrogenase OS=Brucella anthropi (strain ATCC 49188 / DSM 6882 / CCUG 24695 / JCM 21032 / LMG 3331 / NBRC 15819 / NCTC 12168 / Alc 37) OX=439375 GN=betA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00732	GMC_oxred_N	GMC oxidoreductase	Domain	Interproscan
PF05199	GMC_oxred_C	GMC oxidoreductase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012132	Family	Glucose-methanol-choline oxidoreductase	Interproscan
IPR000172	Domain	Glucose-methanol-choline oxidoreductase, N-terminal	Interproscan
IPR007867	Domain	Glucose-methanol-choline oxidoreductase, C-terminal	Interproscan
IPR036188	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11552	GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008812	Molecular Function	choline dehydrogenase activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0019285	Biological Process	glycine betaine biosynthetic process from choline	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0016614	Molecular Function	oxidoreductase activity, acting on CH-OH group of donors	Interproscan