Gene detail

Detailed information of ANN36505-RA in Montipora grisea

Genomic Location: Scaffold_6988__1_contigs__length_25887:20732...22797
NR annotation: MYA07990.1, NAD-dependent isocitrate dehydrogenase [Holophagales bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN36505-RA

ATGGTCCGCGCGGTCAACTTCGTCACCGGCGGCCGCATCGACTGGGAGCCGGTCGTCGCCGGCAGCACGGCGGTCGACCAGGGACTCTCGCCGCTCCCCGACAAGGCGATCGACTCGATCCGCCGCAACCGGATCGCGATCAAGGGACCGCTGCAGACCCCGGTCGCCGGCGGCTGGCGCAGCGTCAACGTACTTCTTCGCCAGTCGCTGGAGCTGTTCGCCTGCGTCAGACCGGTGCGCTCCCTGCCGGGGAACACGCTGGCCCGCTATCAGGGCGTCGACCAGATCATCGTGCGCGAGAACACGGAAGGGCTCTACAGCGGCCGCGAGCACGAAGTCGTCGACGGCGTCGTCGAGGCACTCAAGATCGTCACCCGGGACGCGTCGCGGCGGATCATGCAGTTCGCCTTCGAGTACGCCCGCAGCCACGGCCGCAAGAAGCTCACGATCGTCCACAAGGCCTCGATCACGCCGCTCTCGGACAACCTGTTTCTGGATTGCGCGCGTGAGTGCGAGCGGAACTACCCCTTCTTCCAGGTCGAGTACCTGCCGCTCGACAATCTCGCGCTCGACCTGGCGACCGACCCCACCCGCTTCGACATGCTCGTCATGGGCAACCTGGACGGCGACCTGATCAGCGACCTCTGCGCCGGACTGGTCGGCGGCCTGGGTGTCGTTCCGGGCGCGAACTACGGCGAGGGCTGCGCCGTCTTCGAGGCGGTCCACGGCACGGCGCCGGACATCGCCGGCCGCGACCTGGCCAACCCGATCGCCCTCATCCTGTCGGCGGAGTTGATGCTCCGCTACGTGGGCGAAGCCGACGCGGCCGACCACCTGCGCGCCGGGGTCGAGCGGCTGCTGATCGCCGGCAAGTCGCTCACCCGGGACCTGGGCGGATCGGCGAACACCTCCGAACTCACGGACGCGCTCCTGGCCGAACTCGACGCCCGCCCAATGACCGCGGACGGCAAGACCGCCACCAGACCCCGGGTCGCACTGATCGTCGGCAGCATCGGCATCGGCGCCGAGACCGCGCCGCCGGTGCTCGAGATCCTGGAGTCCGTCGGCGCCGGCTTCGACTTCGTCCGCGTCGACGTGCCGACCGCGGTGCGCCGCAACACGGAGAGTGTCCTGGGCGAAGCGGCCGACACGATCCGCGAGTGCCGGGTGGCGCTGAAGACCCGCCTCATCGGCCCGGGTCGCGACGCCGTGCGGGTGGGGCCGGGACCGCAGAACCCGAACGTCGCCCTGCGGCAGATGCTCGGGCTCTGGGCCAGCGTGCGGCCCGTGCGTTCGATTCCGGGGCTGCCGACCCGCTATCCCGACCTCGACGTGCTACTCATCCGCGAGATCACCGAAAGCGTTTACCGCGGAATCGAGCACGAGATCGTGGACGGCGTGGTCGAGAGCATGAAGGTGGTCAGCCGCGCGGCGTGTGAACGCATCGCGGACTACGCCTTCCGCATCGCCCAGCGTCACGGACGCCGGAAGGTCACGGCCATCCACAAGGCGAACATCATGAAGCAGAGCGACGGCCTGTTCCTGGACACGGTCCGGGACGTCGCCGCCAGCTACCCCGACATCGAGGTGGACGACTGCATCGTCGACGCCGCCTGCATGCGTCTCGTGCTGAATCCGTACGACTTCGACGTGATGCTGATGGAGAACCTCTACGGCGACATCCTGAGCAACCTCGGCGCCGGCCTTGCCGGCGGCATCTCCACCGGCCATGCGATCAACGTCGGCGACGACTGCCACGTCTTCGAGGCCGTCCACGGCGACGCCCCGCACCTGATCGGCACCGGCCAGGCGAACCTGCTGCCGCTGCTCACGCCGGCGATCGCGCTCCTCCGACACTTCGACCTCTACGAGGAGGCGAGCAGGATCGATCAGGCGGTGACCGCCGTCCTCGAGGAAGGCCGGAACCTGACCCCCGACCTGGGCGGCCAGTCGTCCACCTCGCAGATGGCGCGCAGCATCATCGCGGCGATGGGCTAG

Transcript

ANN36505-RA

Protein

Uniprot

Uniprot term	Description
Q9VWH4	Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Drosophila melanogaster OX=7227 GN=Idh3a PE=2 SV=1
Q945K7	Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=IDH5 PE=1 SV=1
Q93714	Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Caenorhabditis elegans OX=6239 GN=idha-1 PE=3 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00180	Iso_dh	Isocitrate/isopropylmalate dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024084	Domain	Isopropylmalate dehydrogenase-like domain	Interproscan
IPR019818	Conserved_site	Isocitrate/isopropylmalate dehydrogenase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11835	DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004449	Molecular Function	isocitrate dehydrogenase (NAD+) activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006099	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0006102	Biological Process	isocitrate metabolic process	Interproscan
GO:0000287	Molecular Function	magnesium ion binding	Interproscan
GO:0016616	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0051287	Molecular Function	NAD binding	Interproscan