Gene detail

Detailed information of ANN36619-RA in Montipora grisea

Genomic Location: Scaffold_1069__1_contigs__length_63308:21391...22740
NR annotation: MYC37975.1, PDZ domain-containing protein [Chloroflexota bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O22609	Protease Do-like 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DEGP1 PE=1 SV=2
Q2SL36	Probable periplasmic serine endoprotease DegP-like OS=Hahella chejuensis (strain KCTC 2396) OX=349521 GN=mucD PE=3 SV=1
A4XSC0	Probable periplasmic serine endoprotease DegP-like OS=Ectopseudomonas mendocina (strain ymp) OX=399739 GN=Pmen_1471 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007504 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13180 all species →	PDZ_2	PDZ domain	Domain	Interproscan
PF13365 all species →	Trypsin_2	Trypsin-like peptidase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001940 all species →	Family	Peptidase S1C	Interproscan
IPR001478 all species →	Domain	PDZ domain	Interproscan
IPR051201 all species →	Family	Chloroplastic and Bacterial Serine Proteases	Interproscan
IPR009003 all species →	Homologous_superfamily	Peptidase S1, PA clan	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43343 all species →	PEPTIDASE S12	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004252 all species →	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04771	degP, htrA; serine protease Do	EC:3.4.21.107	Chaperones and folding catalysts	ko03110	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.