Detailed information of ANN36724-RA in Montipora grisea

Genomic Location: Scaffold_7864__1_contigs__length_23915:1767...5342
NR annotation: NRB61055.1, alanine--tRNA ligase [Winogradskyella sp.]
Species abbreviation MGRIS · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0LXX3Alanine--tRNA ligase OS=Christiangramia forsetii (strain DSM 17595 / CGMCC 1.15422 / KT0803) OX=411154 GN=alaS PE=3 SV=1
A5FIP9Alanine--tRNA ligase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / BCRC 14874 / CCUG 350202 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=alaS PE=3 SV=1
A6H0Y3Alanine--tRNA ligase OS=Flavobacterium psychrophilum (strain ATCC 49511 / DSM 21280 / CIP 103535 / JIP02/86) OX=402612 GN=alaS PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002669 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02272
all species →		DHHA1DHHA1 domainFamilyInterproscan
PF07973
all species →		tRNA_SADThreonyl and Alanyl tRNA synthetase second additional domainDomainInterproscan
PF01411
all species →		tRNA-synt_2ctRNA synthetases class II (A)FamilyInterproscan
PF08885
all species →		GSCFAGSCFA familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045864
all species →		Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR012947
all species →		DomainThreonyl/alanyl tRNA synthetase, SADInterproscan
IPR002318
all species →		FamilyAlanine-tRNA ligase, class IIcInterproscan
IPR023033
all species →		FamilyAlanine-tRNA ligase, eukaryota/bacteriaInterproscan
IPR036514
all species →		Homologous_superfamilySGNH hydrolase superfamilyInterproscan
IPR009000
all species →		Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR003156
all species →		DomainDHHA1 domainInterproscan
IPR018164
all species →		DomainAlanyl-tRNA synthetase, class IIc, N-terminalInterproscan
IPR018163
all species →		Homologous_superfamilyThreonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyInterproscan
IPR018162
all species →		Homologous_superfamilyAlanine-tRNA ligase, class IIc, anti-codon-binding domain superfamilyInterproscan
IPR018165
all species →		DomainAlanyl-tRNA synthetase, class IIc, core domainInterproscan
IPR014982
all species →		DomainGSCFAInterproscan
IPR050058
all species →		FamilyAlanine--tRNA ligaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11777
all species →		ALANYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004812
all species →		Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0043039
all species →		Biological ProcesstRNA aminoacylationInterproscan
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0004813
all species →		Molecular Functionalanine-tRNA ligase activityInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0006419
all species →		Biological Processalanyl-tRNA aminoacylationInterproscan
GO:0002161
all species →		Molecular Functionaminoacyl-tRNA editing activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01872AARS, alaS; alanyl-tRNA synthetaseEC:6.1.1.7
Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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