Gene detail

Detailed information of ANN36746-RA in Montipora grisea

Genomic Location: Scaffold_2319__1_contigs__length_43681:24529...27615
NR annotation: MXZ05083.1, RecQ family ATP-dependent DNA helicase [Rhodothermaceae bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN36746-RA

ATGTGCAGGCGCCCACACATCACCCTTAAGGAAGGACAGCATGAGTGTAGCCAAATGAGGGATTACTACGAAGTGCTTGGCATACAGCAGGATGCTTCGCCGAGGGATATCAAGAGAGCATACCGGCAAGAAGCACATCGCCACCACCCTGATCGCAATCCTGGAGACACACAGGCGGGCACCCGCTTCAAAGAGGCCACTGAGGCTTACAGAGTGCTTAGCGACAGGAACAGGCGGAACCTCTATGATAAGCTTCGTGAGCTTGGGCGCCGACGAGGTGCGAGGCTTCGAATAAGACTGCCGCTCACACTGGAGGAGATTGCCGGCGGCGTCAAAAAACGTATCAAGCTACGCCGATTCATAACGTGCGAACATTGCGGGGGCACTGGTGCGACTAGTGGATTCAAAGAATCATGTTTTGACTGCGACAAGAGCGGACGCTTGGATAGCGAATCAAATCTCACTGTGAATGTGGCGGCAGGCATTGAGACTGGGAGGACGATCAAACTACTTAACGAAGGCGATGCAGGCATCCGAGGTGGCCGCGCAGGCGACCTTTGGGTCAAAGTGCAAGAGCTACCGCATGACCACCTTGTTCGCGACGGCAACAATCTCTTGTACAATCTACGGGTGTCGTTTGCTGAAGCGACAGTCGGCGCCAAAATTGAAGTACCTACATTGAAGGGGACTGTACGCGTACAGATTGATCCTGGCACAAAGTCTGGCACAATTCTGCGACTGCGGGGGCTGGGTATTGGAGGTCTGCCTTCGGGGCTCCGAGGTGACCAGTTAGTGCGGGTGCACGTTGAGAGCCCTCCGAGCAAGTCGGAAGCCGAGAAGACATCTGCAATACAGCGAGAAACATCGACTTCGGTATCAGTAACTCGAAGAAGATCACTAGTGTCGCAGACAGTCCAGGATGATCACGACAATTCCGCATCCCGAATCGACCCAGGGACTGGCTCAACGGCTGATCGGCGCAAGGCGGAGCGCTATCTGCGGATGTTGGTCGGCAATAGGTCGGCTGCATTTCGTGATGGACAGTGGGAAAGCATCGAACTCATTCTGGAAAAGAAGCGTGTCCTAGTCGTGCAGAGAACGGGCTGGGGCAAGTCTGCTGTTTATTTTATCGCTACTCGAATGCTCCGTGATCGTGGTCAGGGTTTGTCCATGATGGTGTCCCCACTCATAGCCCTTATGCGCAACCAGATTCGCGCAGCGCGTGCCTTGGGTCTAAGGGCGGAATTGATTACAGGGGACAATTTCGACGATTGGGGTAGAGGCAAGATTGAACACCGGGTGAGGCAAAATGAGGTTGATTTGCTCATGTTCACACCGGAGCGACTGGCGAATAACTATTTCAGCCAGAACACACTGCCGAAGATCATCGCCAATTGTGCTCTGCTCATCATTGACGAAGCACATTGCATTTCCGACTGGGGACATGACTTTCGTCCAGACTACCAACGCATCAAGCGTGTGCAGGAAGCTATACCCCCCAATGCGCCTGCTGGCATAATTGCGACAACGGCAACCGCTAATAATCGTGTAGTAGCGGATGTTCGCAAGCAACTTGGTCAGAACGTCAAGGTCCACCGGGGCAGTCTGATTCGGAAAAGTTTGCGCCTCCAAAACATCATTTTGCCAAACCAGAAAGCAAGGCTATTATGGCTTGCAAGTGCAATATCTCAGTTGGAAGGCAGTGGCATCATTTACACGCTCACCCGGAAGGATGCGGGATTGGTAGCGGAATGGCTGAGATACTGTAAAATTGATGCATGCGCGTATCACGGCTCGAGCACCGAGCGTAGCGAACTGGAACAGCAACTCATGGGCAATCGCCTGAAGGTGCTGGTGGCTACTGTAGCCTTGGGAATGGGATTTGACAAACCGGATCTGGGGTTCATCATTCACTTCCAGCGTCCTGCGTCTGTCGTCCACTATTACCAGCAGGTGGGCCGTGCGGGACGCGGAATCGACAATGCATTTGGTCTACTGCTGTGGGGAGAAGAAGACGACCGCATTGCCGATTACTTTATGGAGAATGCATTTCCGAAGCAGGACGAAGTCAGAATGATTCTTACCGCCCTCAGTGATGCAGATCTTGGCCTGACACTTGTAGAACTTCTGGCCAAAGTGAATCTCAAGAAATCAACCATTGAGAAAACACTGACGCGGCTCGCCGTGGAATCACCGGCACCGGTCCTGACTTTGAAATGGAGAGAGTGGGCACTGAGAGCTGAAGCCTCTTCAGATTACCAGATAGATCCGAAATATATTGGGCGCCTTCGCCGGATCAGACTGTCGGAAAAGACACAAATGCAAGAATACATGAGACATAGGGGATGCCTTATGAGATTCTTGCAAACGGCGCTCGATGATGACACAGCCGCGAAGTGCAGACGATGCCGTAATTGCCTGGGACGAGATCTTGTTTCGGTTGCCGTGTCGTCATCGCTTACAGACAAGGTGAATCATTTCTTGCGGACTCGTCCCCGGAGGATTCACCCAGAGAAGAAATGGCCCATGCGCCGTCTGTCTGAGCATAAGATTCACAGCAGAGAATGGTTACAGAGCAAATGGAAGCAATACGATTTCATGGCTCTCGAAGGACGGGTTCTATGTGGCTGGGGCGTTGAAGACTGGGAGAAGTACGTCTGGACGGAACGGATGTATAAGGCGAAATACTCGAGGCTGTTCGTGGAAGCAGCATTTGAAATGGTGCGCATCTGGCACCCGAACCCTAAACCCAATTGGATTACCACCGTACCGTCACACAGAGGTACACAACATGTGGATACGTTTGCCGGAGCATTAGCTTCAAGTCTTGGGATTCCCTTTGTTCCGGTGGTTAAGCGCACTAAGAAATGCCAACCTCAGCGGGAGATGAAAAATCATGTGCAGCGCGCCATGAACGTGGCCGACGTATTTGCTGTGGCAGAGCGGGTTCCCGAGGGACATGTCCTTCTGATTGATGATGTGACGGTCAGTGGGTGGACCTTCACCACCGTGGCAGCTCTACTCCGGTTTGCTGGCTGCCAAAGCGTGCGCCCGCTGGCACTCGTTAAGAAAGATCTGGCAGAATAA

Transcript

ANN36746-RA

Protein

Uniprot

Uniprot term	Description
Q2S030	Chaperone protein DnaJ OS=Salinibacter ruber (strain DSM 13855 / M31) OX=309807 GN=dnaJ PE=3 SV=1
Q3AQP5	Chaperone protein DnaJ OS=Chlorobium chlorochromatii (strain CaD3) OX=340177 GN=dnaJ PE=3 SV=1
Q3B2T5	Chaperone protein DnaJ OS=Chlorobium luteolum (strain DSM 273 / BCRC 81028 / 2530) OX=319225 GN=dnaJ PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF01556	DnaJ_C	DnaJ C terminal domain	Domain	Interproscan
PF00226	DnaJ	DnaJ domain	Domain	Interproscan
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR002939	Domain	Chaperone DnaJ, C-terminal	Interproscan
IPR001623	Domain	DnaJ domain	Interproscan
IPR029057	Homologous_superfamily	Phosphoribosyltransferase-like	Interproscan
IPR008971	Homologous_superfamily	HSP40/DnaJ peptide-binding	Interproscan
IPR036869	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR004589	Family	DNA helicase, ATP-dependent, RecQ type	Interproscan
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR002464	Conserved_site	DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR000836	Domain	Phosphoribosyltransferase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13710	DNA HELICASE RECQ FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006457	Biological Process	protein folding	Interproscan
GO:0051082	Molecular Function	unfolded protein binding	Interproscan
GO:0004386	Molecular Function	helicase activity	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan