Gene detail

Detailed information of ANN36765-RA in Montipora grisea

Genomic Location: Scaffold_4683__1_contigs__length_31502:17525...18358
NR annotation: KAF5272380.1, hypothetical protein FQR65_LT17429 [Abscondita terminalis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
B4RXK9	Large ribosomal subunit protein uL13 OS=Alteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype) OX=1774373 GN=rplM PE=3 SV=1
Q15PI3	Large ribosomal subunit protein uL13 OS=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) OX=3042615 GN=rplM PE=3 SV=1
A1SA67	Large ribosomal subunit protein uL13 OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) OX=326297 GN=rplM PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00380	Ribosomal_S9	Ribosomal protein S9/S16	Family	Interproscan
PF00572	Ribosomal_L13	Ribosomal protein L13	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005822	Family	Large ribosomal subunit protein uL13	Interproscan
IPR023035	Family	Small ribosomal subunit protein uS9, bacterial/plastid	Interproscan
IPR000754	Family	Small ribosomal subunit protein uS9	Interproscan
IPR005823	Family	Large ribosomal subunit protein uL13, bacterial-type	Interproscan
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR014721	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR020574	Conserved_site	Small ribosomal subunit protein uS9, conserved site	Interproscan
IPR036899	Homologous_superfamily	Large ribosomal subunit protein uL13 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11545	RIBOSOMAL PROTEIN L13	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0017148	Biological Process	negative regulation of translation	Interproscan
GO:0022625	Cellular Component	cytosolic large ribosomal subunit	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02996	RP-S9, MRPS9, rpsI; small subunit ribosomal protein S9	-	Ribosome	ko03011	deepkoala