Genomic Location: Scaffold_5907__1_contigs__length_28297:26415...28197
NR annotation: WP_068516286.1, MULTISPECIES: lipid A export permease/ATP-binding protein MsbA [unclassified Oleiphilus]
| CDS | ||||
| ANN36768-RA | ||||
| Transcript |
| ANN36768-RA |
| Protein |
| ANN36768-RA |
| Uniprot term | Description |
|---|---|
| Q2SIN5 | ATP-dependent lipid A-core flippase OS=Hahella chejuensis (strain KCTC 2396) OX=349521 GN=msbA PE=3 SV=1 |
| Q1QX69 | ATP-dependent lipid A-core flippase OS=Chromohalobacter salexigens (strain ATCC BAA-138 / DSM 3043 / CIP 106854 / NCIMB 13768 / 1H11) OX=290398 GN=msbA PE=3 SV=1 |
| Q9HUG8 | ATP-dependent lipid A-core flippase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=msbA PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00664 | ABC_membrane | ABC transporter transmembrane region | Family | Interproscan |
| PF00005 | ABC_tran | ABC transporter | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011527 | Domain | ABC transporter type 1, transmembrane domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR036640 | Homologous_superfamily | ABC transporter type 1, transmembrane domain superfamily | Interproscan |
| IPR017871 | Conserved_site | ABC transporter-like, conserved site | Interproscan |
| IPR003593 | Domain | AAA+ ATPase domain | Interproscan |
| IPR003439 | Domain | ABC transporter-like, ATP-binding domain | Interproscan |
| IPR039421 | Family | Type 1 protein exporter | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24221 | ATP-BINDING CASSETTE SUB-FAMILY B | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0055085 | Biological Process | transmembrane transport | Interproscan |
| GO:0140359 | Molecular Function | ABC-type transporter activity | Interproscan |
| GO:0016887 | Molecular Function | ATP hydrolysis activity | Interproscan |
| GO:0034040 | Molecular Function | ATPase-coupled lipid transmembrane transporter activity | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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