Gene detail

Detailed information of ANN36775-RA in Montipora grisea

Genomic Location: Scaffold_2257__1_contigs__length_44349:30875...32200
NR annotation: HAU91293.1, HslU--HslV peptidase ATPase subunit [Alteromonas sp.]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B4RY96	ATP-dependent protease ATPase subunit HslU OS=Alteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype) OX=1774373 GN=hslU PE=3 SV=1
Q15N47	ATP-dependent protease ATPase subunit HslU OS=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) OX=3042615 GN=hslU PE=3 SV=1
Q12IT8	ATP-dependent protease ATPase subunit HslU OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) OX=318161 GN=hslU PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0018186 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07724 all species →	AAA_2	AAA domain (Cdc48 subfamily)	Domain	Interproscan
PF00004 all species →	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004491 all species →	Family	Heat shock protein HslU	Interproscan
IPR003959 all species →	Domain	ATPase, AAA-type, core	Interproscan
IPR019489 all species →	Domain	Clp ATPase, C-terminal	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR050052 all species →	Family	ATP-dependent Clp protease ATP-binding subunit ClpX	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48102 all species →	ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0008233 all species →	Molecular Function	peptidase activity	Interproscan
GO:0009376 all species →	Cellular Component	HslUV protease complex	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0051603 all species →	Biological Process	proteolysis involved in protein catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03667	hslU; ATP-dependent HslUV protease ATP-binding subunit HslU	-	Chaperones and folding catalysts	ko03110	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.