Detailed information of ANN36799-RA in Montipora grisea

Genomic Location: Scaffold_9800__1_contigs__length_16203:11112...12377
NR annotation: MXW47775.1, histidine--tRNA ligase [Gammaproteobacteria bacterium]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q15R57Histidine--tRNA ligase OS=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) OX=3042615 GN=hisS PE=3 SV=1
B8CKR2Histidine--tRNA ligase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) OX=225849 GN=hisS PE=3 SV=1
Q0HX56Histidine--tRNA ligase OS=Shewanella sp. (strain MR-7) OX=60481 GN=hisS PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0017424 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03129
all species →		HGTP_anticodonAnticodon binding domainDomainInterproscan
PF13393
all species →		tRNA-synt_HisHistidyl-tRNA synthetaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004154
all species →		DomainAnticodon-bindingInterproscan
IPR036621
all species →		Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR045864
all species →		Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR041715
all species →		DomainClass II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domainInterproscan
IPR015807
all species →		FamilyHistidine-tRNA ligaseInterproscan
IPR004516
all species →		FamilyHistidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunitInterproscan
IPR006195
all species →		DomainAminoacyl-tRNA synthetase, class IIInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43707
all species →		HISTIDYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004821
all species →		Molecular Functionhistidine-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006427
all species →		Biological Processhistidyl-tRNA aminoacylationInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01892HARS, hisS; histidyl-tRNA synthetaseEC:6.1.1.21
Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP