Gene detail

Detailed information of ANN37068-RA in Montipora grisea

Genomic Location: Scaffold_843__1_contigs__length_70736:56426...59599
NR annotation: MBX2851233.1, FHA domain-containing protein [Phycisphaeraceae bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN37068-RA

ATGACTAGCTCAAGCAAACCCTGGGAACACGCCAAGTCCTCCGGCAGCGAAGAAGACCCGCTGGCTGCGCGGTTCGTTGCGTCGCTGGACTACGACAAACGCCTGTACAAGCACGACATCCGCGGGTCCAAGGCCCACGCCACGATGCTCCTCAAAGTCGGCCTGATCACCCCGGAAGACCTCTCTGCGATCAACGCGGGTCTCGACGAGATCGAACAAGAGATCGATCAACAGGGGGATGCCTGGCCCGGCTGGAAGGTCGAGCTCGAAGATGTGCACATGTGCGTCGAAGCGGCGCTGATCGAAAAGGCCGGCGATGCGGGGCGGAAGCTGCACACCGGCAGATCGCGGAACGATCAGGTGGCGCTGGACTTGAAGCTCTGGATTGATGAAGCCGGGGAAGAGATCGGCGACCGGCTCATCGCATTGATCGATGCATTGGTCCAACTCGCAGAGAAGGAAGGCATGCTAGTGATGCCATCGTATACCCACCTGCAGCGTGCCCAGCCGGTTGTGCTCGGCGGCGAGTTGATGGGGTGGGCCGCATCGTTTTGGCGTTGTTGGGAGCGTAGCTCGTTCTTCGAGTCGGTAAATCAGGAAAACCCATTGGGATCCGGTGCCGTGGCGGGATCGAGCCTCCCGCTGGATCGCCGTGAAGTCGCAATGAACCTCCCCGTGGGGATGCCCACCGAGAACAGTATCGACGCAACCGCTTCGCGCGACGCGGCCCTCGACTTCGCCTACGCCCTCACCATGACCTCCATGTGGCTCTCCCGCTGGGCCGAGCAGTGGATCATCTACGCCACGACCGAGTTCGGCTTCATCACATTGGCCGACACGTACACCACCGGCTCATCCATGATGCCGCAGAAGCAGAACCCGGACATGCTCGAGCTGATCCGGGGCAAGACCGGCCAGGTCTACGGCTCGCTCATCGCGCTGCTCACCATGTGCAAGGGCATCACCGTCGGCTACAACCGCGATCTGCAGGAAGACAAGCGCCACCTCTTCGCGGCGTATGACTCGGTCTGCGACTGCCTGGACATGGCCGCGGGCATCGTCCGCACCACCACCTTCAATGAAGATCGCATCAAGGCTGGCCTCGATAAGGGTTACCTCGACGCGACATCACTTGCCGAGTACCTCGTGACCAAGGGCGTGCCGTTCCGCACCAGCCACCAGATCGTCGGCCGGATGGTGGGCCTGTGCGAAGAGCGCGGCTTAGGGATGCTCAAGAAGCTCGACGTCGCCGACTTCAACGCGGTCTGCAAGGAGTACAACGCCGGCGAGCCGGTCAGCGACGACATCTTCGACTGGCTCGGACCGGAGAACGTGGTGAAGCGCTACCAGTCCGCCGGCAACGCGGGGGGACCGGACAAGGGGTTGAAGATCACCCTGCCCGACGATGAGCCGCAGCTGATCGGCCGGTCGTCCGAGGCGATCGTGCTTTCGGACCAGACGATCTCCCGACGCCACGCCGAGCTCACCCCCGAGGGCGATGGCACGTGGTACATCCGCGACCTGCAATCCTCTAACGGTACGTTCGTCAACGGGGTGCGCGTCTCCGAACGACGCAAGCTCAAGCTCGGCGACCAGGTCCGCACCGGCAACTCGCTGTTGATCTACGGCGAGAACGCGCCCAACCCGCTGGCCAACCGGCTCAAGCTCGCCCCGTCCAGCGAGATGGACGTCGCCGTCGAACGCACCGTCGACGCCAACGAAGAGTCAATGATCATGTCCTCGCCCGAGCCCTCGCAGGCCGCCGAGTTCCAGCTGCAGATCATCTACCAGCTCGTCGCGCTGATCGGCTCGGTGACCGACAAGCAGGAGCTGCTCGAGAAGACGATGGACGTCGTCTTCGAGTATTTCGCCGCCGACCGCGGGTTCGTGCTGATCGGCGACAGCGTCGTGGACGACCCCGAGCCGGCGGTCATGCGCTTCCGCGAGGACGAGGACACGCTCCCGGACCCCAACCGCAAGGCCACCATCAGCCGAACGATCGTCCAGTACGTCCTGGAACGCGGCGTCGCGGTCCTCTCGTCCAACGCCATGAACGACACCCGGTTCACCTCCGGCGACTCGATCCAGGCCTACGGTATCCGCTCGGCCATGTGCGTGCCCATCAAGCACAAGGACCACGTCTACGGCGTGATCCAGGTCGACTCCCAGATCGCCAACTACACCTTCACCGAGGACCAGCTCTCTTTGCTCGCCGCGATCGGCGTGCAGACGGGCCTGGCGATGGACAACGCCCGCCTGCTCGAGCAGCGCATGCAGGAAGAACGCCTCGCCGCGGTCGGCAGCGCGGTCGCGTCGCTGTCGCACTCGATCAAGAACATCCTCCAGGGCATGCGCGGCGGGTCGGACGTTGTTGAGCTTGGGATGCGCAAGAAGTCGATGGACGTGACGGTCAAGGGCTGGGACATCGTCCGCCGAAACCAGGAGAAGATCTACCAGCTGACGCTGAACATGCTGCAGTTCAGTAAGCAGCGCCAGCCCGAGCTGTCGATGGAGCACCTGCTGCCGATGTTCAAGGACCTGGCCGGGCTGGTGCAGAGCCAGTTCGACGCGAAGAAGGTCGCGCTGATCACGGACGTCGAGCCCGACCTCCCGCCGGTGCCGATCGAGCTGTCGGGCATCCACCAGGCGGTGCTGAACCTTTTGCAGAACGCGCTGGATGCCAGCGAGCCGGACACCGGCGTCGTGACCCTCGCCTGCCGATTCGACGAGCTGGGCCACGAGGTCCACATCATCGTCACCGACAACGGCATCGGCATGAGCCGGGCGACCCAGCGCGACCTCTTCCAGCCCTTCCACTCGACCAAGGGCTACGGCGGCACGGGCCTGGGGCTCGTCGTCACCCGCAAGATCGTCCAGGAGCACGGCGGGGAGATCGAGGTCAAGTCCAAGCTCAAGAAGGGCACGACCTTCACCATCTCCCTGCCCACCGAGCACGACCGCGAGCCCGCCGCCACCCACAGCCCCTTCTAA

Transcript

ANN37068-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9LEU8	Argininosuccinate lyase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g10920 PE=1 SV=1
A5D4Y2	Argininosuccinate lyase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) OX=370438 GN=argH PE=3 SV=1
Q8GDU5	Argininosuccinate lyase (Fragment) OS=Heliobacterium mobile OX=28064 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002688 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14698 all species →	ASL_C2	Argininosuccinate lyase C-terminal	Domain	Interproscan
PF02518 all species →	HATPase_c	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	Domain	Interproscan
PF00206 all species →	Lyase_1	Lyase	Domain	Interproscan
PF00498 all species →	FHA	FHA domain	Family	Interproscan
PF01590 all species →	GAF	GAF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020557 all species →	Conserved_site	Fumarate lyase, conserved site	Interproscan
IPR029016 all species →	Homologous_superfamily	GAF-like domain superfamily	Interproscan
IPR003594 all species →	Domain	Histidine kinase/HSP90-like ATPase	Interproscan
IPR024083 all species →	Homologous_superfamily	Fumarase/histidase, N-terminal	Interproscan
IPR009049 all species →	Family	Argininosuccinate lyase	Interproscan
IPR008984 all species →	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR029419 all species →	Domain	Argininosuccinate lyase, C-terminal	Interproscan
IPR000362 all species →	Family	Fumarate lyase family	Interproscan
IPR003018 all species →	Domain	GAF domain	Interproscan
IPR036890 all species →	Homologous_superfamily	Histidine kinase/HSP90-like ATPase superfamily	Interproscan
IPR005467 all species →	Domain	Histidine kinase domain	Interproscan
IPR022761 all species →	Domain	Fumarate lyase, N-terminal	Interproscan
IPR000253 all species →	Domain	Forkhead-associated (FHA) domain	Interproscan
IPR008948 all species →	Homologous_superfamily	L-Aspartase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43814 all species →	ARGININOSUCCINATE LYASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0004056 all species →	Molecular Function	argininosuccinate lyase activity	Interproscan
GO:0042450 all species →	Biological Process	arginine biosynthetic process via ornithine	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN37068-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.