Gene detail

Detailed information of ANN37075-RA in Montipora grisea

Genomic Location: Scaffold_8124__1_contigs__length_23316:19635...21953
NR annotation: EED32918.1, cell division protein FtsK [gamma proteobacterium NOR5-3]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN37075-RA

ATGGCCCGACAACAATCAGAACAGACCGACGCGGGGGCGCACCGACTGCGCGAGGGGCTGCTTATCGCCGTTGCCGCGGCCTGCCTGTATCTGCTGGTGAGCCTGGCCAGCTATTCGCAGGTGGATCCGGGCTGGTCCGCCACCGGCGATGGCACTTCCGTACGTAATCTGGGCGGTCCCGCGGGCGCCTGGATCGCCGATATTTTCTTTTCTCTGGTGGGCTACCTGGCCTACCTGTTTCCGCTGATGCTGGCCTACCGGGCGGCGCTGCTGTTTGCAGAGCGAGACAGGCCTCAGGCATTTTCTGGCACGACGTTGTCAATCCGGGCCCTCGGTCTGGTGCTGGTAATGGCGGCGGGCACCGCCATCGTTGCCCTTAACCTCGGTAGCCGCGGAGAACTTCCCCAGGGCGCCGGCGGGATCGTCGGCCAGGCTATCGGTAGCGCCATGGCCGGGGCCTTCAGCGGTTTCGGCGCGCGTCTGATCCTGGTGGCCGTGTTCCTGTTTGGCATGACGATCTTTACGGACCTGAGCTGGCTACGGCTGATGGATCGCCTGGGCGCCCTGGCCATTACCGGCTGGCAGCGCGCCAAGGCCCTCACCTTGGGCTTTGTGGACCGCCAGCGTGATCGTCGCGCCCGCGAGAAGCAGATAGAAGCGCGGCGCCAGGTCATCGACCAGCACGTAGAAAAAGAGAAAAAGCGCAAACCGCCGAAGATCAAACCGCTCAAGCCGCCGCCCGCCAAGTCTGATCGTGCCGAGCGCGAAAAGCAGGTGCCGCTGTTCGATGCGCCGGTCACGGGTGATCTGCCGCCCCTCGAATTACTCGATCCCGCTGTACATGATTCCGAGCTGGGTTACTCCAAAGAAGCGCTCGAGAAACTGTCCAAACTGCTGGAACTCAAACTCCTAGATTTCGGTGTCTCCGCCGAAGTGACCGCCGTGTATCCGGGCCCTGTGATCACCCGCTTCGAAATCCAGCCTGCGGCGGGGGTCAAGGTATCGCGCATCTCCAACCTCGCCAAAGACCTGGCCCGCTCCCTGGCGGTGATTTCGGTGCGGGTAGTAGAAGTGATTCCAGGTAAGAGCGTTGTAGGCATCGAGATTCCCAACGAGCACCGCGAGATCGTGAATTTCCGCGAGGTGCTCTCATCCAAAGCGTTTGACCAGTCTCGTTCCAGCCTGACGCTGGCGCTGGGGCACGACATCTCCGGTCAGCCGGTTGTGGCGGATCTTGCGCGCATGCCTCACCTGCTAGTGGCGGGCACCACGGGCTCGGGTAAGTCCGTTGGCGTGAACGCCATGCTGCTGAGCCTGCTGTACAAGTCCACACCCGCCGATGTGCGCCTGATCCTGGTGGACCCCAAGATGCTCGAACTGTCGGTCTACGACGGCATTCCCCACCTGTTGACCCCGGTTATCACCGACATGAAAGACGCGGCGAACGGCCTGCGCTGGTGCGTTGCCGAGATGGAGCGTCGCTACAAGCTCATGGCCGCGCTGGGAGTGCGGAACCTGGCCGGCTACAACCGCAAGATTGCCGAGGCCGACAAGGCGGGTACGCCGATTGCCGATCCTCTCTGGGGTCTGCCCGACCAGTTGTCGATGACCCCTGTCGACGAACAGGAGGCACCGATGCTCGAAGTGCTTCCTGCCATCGTCGTGGTGATCGACGAGTTCGCCGACATGATGATGATCGTCGGCAAGAAGGTCGAAGAACTCATTGCCCGTATCGCGCAAAAAGCACGTGCCGCGGGTATCCACCTGATACTGGCGACACAGCGCCCGTCGGTGGACGTGATCACGGGCCTGATCAAGGCCAATATCCCCACGCGCATTGCCTTTCAGGTCAGCTCCAAAGTGGACTCCCGTACGATTCTGGATCAGGGTGGCGCCGAGCAACTGCTGGGGCACGGTGACATGCTTTACCTGCCGCCGGGGCACGGTATTCCCAACCGCGTGCATGGTGCCTTCTGCTCCGACGATGAGGTACACCGGGTGGTCGCGGACTGGAAGCGACGCGGTGAGCCCGCGTACATAGAAGGGCTGTTGGACGAAGGTAGCGCAACGCCCGTCACTGCGGGTGAGCTCCAGTCTGAAGGTGGCGACGACTCAGAGAGCGACGCCCTGTACGACGAAGCCGTGCATTACGTCACCCAGAGTCGGCGCGCTTCGATTTCGAGTGTGCAGCGCAAGCTGCGTATCGGCTACAACCGGGCGGCGCGACTCATCGAAGCGATGGAAGCCGCCGGGGTTGTCTCCGAGATGGGTACCAATGGTCAGCGCGAGGTGATCGCGCCACCGCCCGTAGAGGACTGA

Transcript

ANN37075-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9I0M3	DNA translocase FtsK OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=ftsK PE=1 SV=1
Q87ZS5	DNA translocase FtsK OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=ftsK PE=3 SV=1
Q9Z3U1	DNA translocase FtsK OS=Pseudomonas syringae pv. syringae (strain B728a) OX=205918 GN=ftsK PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0013375 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13491 all species →	FtsK_4TM	4TM region of DNA translocase FtsK/SpoIIIE	Domain	Interproscan
PF09397 all species →	FtsK_gamma	Ftsk gamma domain	Domain	Interproscan
PF17854 all species →	FtsK_alpha	FtsK alpha domain	Domain	Interproscan
PF01580 all species →	FtsK_SpoIIIE	FtsK/SpoIIIE family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR018541 all species →	Domain	FtsK gamma domain	Interproscan
IPR025199 all species →	Domain	DNA translocase FtsK, 4TM region	Interproscan
IPR050206 all species →	Family	FtsK/SpoIIIE/SftA cell division and DNA translocation	Interproscan
IPR041027 all species →	Domain	FtsK alpha domain	Interproscan
IPR002543 all species →	Domain	FtsK domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22683 all species →	SPORULATION PROTEIN RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03466	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.