Detailed information of ANN37139-RA in Montipora grisea

Genomic Location: Scaffold_3557__1_contigs__length_35748:10031...12286
NR annotation: NIR32345.1, DNA topoisomerase IV subunit A [Gammaproteobacteria bacterium]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9HUK1DNA topoisomerase 4 subunit A OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=parC PE=3 SV=1
P0AFI3DNA topoisomerase 4 subunit A OS=Escherichia coli O157:H7 OX=83334 GN=parC PE=3 SV=1
P0AFI2DNA topoisomerase 4 subunit A OS=Escherichia coli (strain K12) OX=83333 GN=parC PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0011147 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00521
all species →		DNA_topoisoIVDNA gyrase/topoisomerase IV, subunit AFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035516
all species →		Homologous_superfamilyDNA gyrase/topoisomerase IV, subunit A, C-terminalInterproscan
IPR005742
all species →		FamilyDNA topoisomerase IV, subunit A, Gram-negativeInterproscan
IPR013758
all species →		Homologous_superfamilyDNA topoisomerase, type IIA, domain A, alpha-betaInterproscan
IPR013760
all species →		Homologous_superfamilyDNA topoisomerase, type IIA-like domain superfamilyInterproscan
IPR002205
all species →		DomainDNA topoisomerase, type IIA, domain AInterproscan
IPR050220
all species →		FamilyType II DNA TopoisomerasesInterproscan
IPR013757
all species →		Homologous_superfamilyDNA topoisomerase, type IIA, alpha-helical domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43493
all species →		DNA GYRASE/TOPOISOMERASE SUBUNIT AInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0003918
all species →		Molecular FunctionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0005694
all species →		Cellular ComponentchromosomeInterproscan
GO:0006265
all species →		Biological ProcessDNA topological changeInterproscan
GO:0006259
all species →		Biological ProcessDNA metabolic processInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0007059
all species →		Biological Processchromosome segregationInterproscan
GO:0009330
all species →		Cellular ComponentDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02621parC; topoisomerase IV subunit AEC:5.6.2.2
Prokaryotic defense systemko02048deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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