Gene detail

Detailed information of ANN37357-RA in Montipora grisea

Genomic Location: Scaffold_3120__1_contigs__length_38112:19073...20548
NR annotation: CAD7847857.1, General secretion pathway protein E [Olavius algarvensis Gamma 3 endosymbiont]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q00512	Type II secretion system protein E OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=xcpR PE=1 SV=1
P31741	Type II secretion system protein E OS=Aeromonas hydrophila OX=644 GN=exeE PE=3 SV=1
P31702	Type II secretion system protein E OS=Dickeya chrysanthemi OX=556 GN=outE PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0011531 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00437 all species →	T2SSE	Type II/IV secretion system protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001482 all species →	Domain	Type II/IV secretion system domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR013369 all species →	Family	Type II secretion system protein GspE	Interproscan
IPR037257 all species →	Homologous_superfamily	Type II secretion system protein GspE, N-terminal superfamily	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR30258 all species →	TYPE II SECRETION SYSTEM PROTEIN GSPE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0015627 all species →	Cellular Component	type II protein secretion system complex	Interproscan
GO:0015628 all species →	Biological Process	protein secretion by the type II secretion system	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02454	gspE; general secretion pathway protein E	EC:7.4.2.8	Secretion system	ko02044	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.