Genomic Location: Scaffold_3985__1_contigs__length_33773:20056...22938
NR annotation: MCP4080637.1, aminomethyl-transferring glycine dehydrogenase [Planctomycetaceae bacterium]
| CDS | |||||
| ANN37413-RA | |||||
| Transcript |
| ANN37413-RA |
| Protein |
| ANN37413-RA |
| Uniprot term | Description |
|---|---|
| Q48ME3 | Glycine dehydrogenase (decarboxylating) OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) OX=264730 GN=gcvP PE=3 SV=1 |
| Q887L5 | Glycine dehydrogenase (decarboxylating) OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=gcvP PE=3 SV=1 |
| Q4ZXH2 | Glycine dehydrogenase (decarboxylating) OS=Pseudomonas syringae pv. syringae (strain B728a) OX=205918 GN=gcvP PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF21478 | GcvP2_C | Glycine dehydrogenase, C-terminal domain | Domain | Interproscan |
| PF02347 | GDC-P | Glycine cleavage system P-protein | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR015422 | Homologous_superfamily | Pyridoxal phosphate-dependent transferase, small domain | Interproscan |
| IPR015424 | Homologous_superfamily | Pyridoxal phosphate-dependent transferase | Interproscan |
| IPR020581 | Family | Glycine cleavage system P protein | Interproscan |
| IPR015421 | Homologous_superfamily | Pyridoxal phosphate-dependent transferase, major domain | Interproscan |
| IPR003437 | Family | Glycine dehydrogenase (decarboxylating) | Interproscan |
| IPR049316 | Domain | Glycine dehydrogenase, C-terminal domain | Interproscan |
| IPR049315 | Domain | Glycine cleavage system P-protein, N-terminal domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11773 | GLYCINE DEHYDROGENASE, DECARBOXYLATING | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004375 | Molecular Function | glycine dehydrogenase (decarboxylating) activity | Interproscan |
| GO:0006546 | Biological Process | glycine catabolic process | Interproscan |
| GO:0006544 | Biological Process | glycine metabolic process | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0005960 | Cellular Component | glycine cleavage complex | Interproscan |
| GO:0016594 | Molecular Function | glycine binding | Interproscan |
| GO:0019464 | Biological Process | glycine decarboxylation via glycine cleavage system | Interproscan |
| GO:0030170 | Molecular Function | pyridoxal phosphate binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K00281 | GLDC, gcvP; glycine cleavage system P protein (glycine dehydrogenase) | EC:1.4.4.2 | Lipoic acid metabolism | ko00785 | deepkoala |