Gene detail

Detailed information of ANN37424-RA in Montipora grisea

Genomic Location: Scaffold_6502__1_contigs__length_26875:2170...4838
NR annotation: WP_281388648.1, ABC transporter transmembrane domain-containing protein [Litorivivens lipolytica]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN37424-RA

ATGAAAAGCCTTTTGTTAAGTTTTGCTCTCGCCTTATCAACCTTGGTGGCTGCTCAGGTTCAGGCAGCGAACTATGCCATTGATGTGAAGGGTGCTCATGCGTTTGTACAATTCAAAATTAAGCATTTGGGTTATAGCTGGCTGCTAGGTCGCTTTAATGAATTCGATGGGCAATTCTCTTATGATGCCTCGGCGCCAGAGAAATCCTCGATAGAAGTTGTCATCGAAACCGCCAGTATCGACTCTAACCATGCAGAGCGTGATAAACATTTAAAAGGTTCCGATTTTTTAGATGTGAAGAAATTTCCCAAGGCGACATTCAAAAGTACAAAATTTGATGTAAAAGATGATGATAATGCTGTTGTCACTGGCATGTTCACCCTGCATGGCGTTGAAAAGGAGATTAGTTTCCCTGTGCAAAAAATCGGTGAAGGTAAAGACCCTTGGGGTGGCTATCGTGTGGGCTTTGAAGGTAAAACCTCACTGAAGCTCGCTGACTATGGTATTACCTATAATTTAGGACCTGCTTCGACTCACGTAGAGATTCTGCTTTATCTCGAAGCCATCGCGACCTTTGTTCGTTTTTATATGGTTTCCTGGATTGGAGAGCGTGTGAGTGCGGATATTCGAACAGCGGTTTTTAATCATGTGGTGGGATTGCACCCTGGCTATTTCGAGACGAATCTCAGTGGTGAAATTCAATCTCGTATTACGACGGATACCACACTTTTGCAAACGGCAGTGGGTTCTTCTGTTTCTATGGCGCTACGTAATATCCTGGTGTTTATCGGCGGCATTATTTTGATGATAGTGACGAATATTAAGTTAGCAGCTTTAGCGTTGGTGTCAGTGCCCTTGGTCGTTCTGCCGTTAGTGATATTTGGTCGTCGTGTGCGAGCTTTATCTCGTTCTAGCCAGGATAGCTTAGCTGAAGTTGGTACCTATGTTGGTGAAGTTATAAAGAACATTAAGGTTGTTCAGGCGTTTAATCACCAAGAACGGGATCGACATCGGCTCAATGAACATGTTGAAAAAACCTTTCAGGTTTCAATTCAGCGAATTAATCGTCGTGCTTGGCTTACCACTTGCGCCATTGTCATGATTTTTTTTGCCATGGCAGGTGTTCTATGGATTGGTGGCCATGATGTGTTACAAGGGAATATTACTGCGGGTGAGCTGACTGCCTTTGGTTTCTATGCGGTTATTGTGGCTTTTTCGGTGGCAGTGATTAGCGAAGTGTATGGAGACCTACAGCGAGCAGCAGGAGCAAGTGAACGTTTGTTGGAATTACTACATGCAGAGAATTTAATTGTTTCTCCCACCAGCGAAGAAACGTTTTCGACCCAAGTGTCAGGGCATTTATGCCTGAAGAGCGTGAGCTTTTCCTACCCCTCGCGTCCTGATGTATTAGCCATTCGTGATCTAAATCTCGAAGTCAAGCCGGGAACTTCTGTGGCGTTAGTGGGAAGTTCAGGTGCAGGGAAATCGACTCTGATCGACCTCATTCTTCGTTTTTATGATATTCAGTCAGGCCACCTAACCTTTGATGGTATCGATATCCGTCAGCTAGACCCGCTCACCTTACGTCGCCACATTGCCTTAGTGCCTCAACAGCCTGTCTTATTCAGTGGGACGATTTTGGAAAATATTCGTTACAGTTTACCCGAAGCATCTTTTGAGCAAGTTGTTGAAGCCGCAAAGTCCGCTTATGCAGATGAGTTTATCCAGCGTCTGCCTGACGGCTATCACTCTCAAGTCGGTGAGGCAGGTGTGCGTCTATCAGGGGGGCAACGTCAACGTATTGCCATTGCTCGGGCCTTACTCGCTGATCCAAAATTACTGTTACTTGATGAAGCAACCAGTGCTTTAGATGCGGAGAGTGAATATCAAGTACAACAAGCATTAGAACGATTGATGCGTGACAGAACCTCGATTGTTATTGCTCACCGACTCGCAACAGTAGTGAACGTGGATCGAATTGTGGTAATGGATCATGGTCAGGTGGTCGCTTCAGGTTCCCATAAAGAGCTACTGGCCCAATCGGATCTCTACGCGCGCTGGGCTCAACTGCAATTTGATAATGGGGCTGAATTGACGCCAACGTGA

Transcript

ANN37424-RA

Protein

Uniprot

Uniprot term	Description
Q54BU4	ABC transporter B family member 1 OS=Dictyostelium discoideum OX=44689 GN=abcB1 PE=3 SV=1
Q54W24	ABC transporter B family member 4 OS=Dictyostelium discoideum OX=44689 GN=abcB4 PE=3 SV=1
Q1RJ91	Putative export ATP-binding/permease protein RBE_0492 OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=RBE_0492 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04264	YceI	YceI-like domain	Domain	Interproscan
PF00005	ABC_tran	ABC transporter	Domain	Interproscan
PF00664	ABC_membrane	ABC transporter transmembrane region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003439	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR007372	Domain	Lipid/polyisoprenoid-binding, YceI-like	Interproscan
IPR036761	Homologous_superfamily	Lipid/polyisoprenoid-binding, YceI-like superfamily	Interproscan
IPR039421	Family	Type 1 protein exporter	Interproscan
IPR036640	Homologous_superfamily	ABC transporter type 1, transmembrane domain superfamily	Interproscan
IPR017871	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011527	Domain	ABC transporter type 1, transmembrane domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24221	ATP-BINDING CASSETTE SUB-FAMILY B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0042626	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0140359	Molecular Function	ABC-type transporter activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06147	ABCB-BAC; ATP-binding cassette, subfamily B, bacterial	-	Transporters	ko02000	deepkoala