Genomic Location: Scaffold_3362__1_contigs__length_36766:24457...25398
NR annotation: WP_160969927.1, tRNA dihydrouridine synthase DusB [Pseudomaricurvus sp. HS19]
| CDS | |||||
| ANN37429-RA | |||||
| Transcript |
| ANN37429-RA |
| Protein |
| ANN37429-RA |
| Uniprot term | Description |
|---|---|
| Q87VS1 | tRNA-dihydrouridine synthase B OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=dusB PE=3 SV=1 |
| Q9HUW1 | tRNA-dihydrouridine synthase B OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=dusB PE=3 SV=1 |
| Q88DK5 | tRNA-dihydrouridine synthase B OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=dusB PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01207 | Dus | Dihydrouridine synthase (Dus) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR035587 | Domain | DUS-like, FMN-binding domain | Interproscan |
| IPR018517 | Conserved_site | tRNA-dihydrouridine synthase, conserved site | Interproscan |
| IPR032887 | Family | tRNA-dihydrouridine synthase B | Interproscan |
| IPR013785 | Homologous_superfamily | Aldolase-type TIM barrel | Interproscan |
| IPR004652 | Family | tRNA-dihydrouridine synthase DusB-like | Interproscan |
| IPR001269 | Family | tRNA-dihydrouridine synthase | Interproscan |
| IPR024036 | Homologous_superfamily | tRNA-dihydrouridine synthase, putative, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45846 | TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0008033 | Biological Process | tRNA processing | Interproscan |
| GO:0017150 | Molecular Function | tRNA dihydrouridine synthase activity | Interproscan |
| GO:0050660 | Molecular Function | flavin adenine dinucleotide binding | Interproscan |
| GO:0002943 | Biological Process | tRNA dihydrouridine synthesis | Interproscan |
| GO:0016491 | Molecular Function | oxidoreductase activity | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K05540 | dusB; tRNA-dihydrouridine synthase B | EC:1.-.-.- | Transfer RNA biogenesis | ko03016 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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