Genomic Location: Scaffold_3629__1_contigs__length_35315:25941...27599
NR annotation: WP_113790047.1, choline dehydrogenase [Ruegeria sp. A3M17]
| CDS | |||||
| ANN37480-RA | |||||
| Transcript |
| ANN37480-RA |
| Protein |
| ANN37480-RA |
| Uniprot term | Description |
|---|---|
| A6X2G7 | Oxygen-dependent choline dehydrogenase OS=Brucella anthropi (strain ATCC 49188 / DSM 6882 / CCUG 24695 / JCM 21032 / LMG 3331 / NBRC 15819 / NCTC 12168 / Alc 37) OX=439375 GN=betA PE=3 SV=1 |
| Q8G1Z8 | Oxygen-dependent choline dehydrogenase OS=Brucella suis biovar 1 (strain 1330) OX=204722 GN=betA PE=3 SV=1 |
| A5VPA6 | Oxygen-dependent choline dehydrogenase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) OX=444178 GN=betA PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05199 | GMC_oxred_C | GMC oxidoreductase | Domain | Interproscan |
| PF00732 | GMC_oxred_N | GMC oxidoreductase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036188 | Homologous_superfamily | FAD/NAD(P)-binding domain superfamily | Interproscan |
| IPR007867 | Domain | Glucose-methanol-choline oxidoreductase, C-terminal | Interproscan |
| IPR000172 | Domain | Glucose-methanol-choline oxidoreductase, N-terminal | Interproscan |
| IPR012132 | Family | Glucose-methanol-choline oxidoreductase | Interproscan |
| IPR011533 | Family | Oxygen-dependent choline dehydrogenase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11552 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0016614 | Molecular Function | oxidoreductase activity, acting on CH-OH group of donors | Interproscan |
| GO:0050660 | Molecular Function | flavin adenine dinucleotide binding | Interproscan |
| GO:0008812 | Molecular Function | choline dehydrogenase activity | Interproscan |
| GO:0019285 | Biological Process | glycine betaine biosynthetic process from choline | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0016491 | Molecular Function | oxidoreductase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K00108 | betA, CHDH; choline dehydrogenase | EC:1.1.99.1 | Glycine, serine and threonine metabolism | ko00260 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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