Gene detail

Detailed information of ANN37556-RA in Montipora grisea

Genomic Location: Scaffold_7917__1_contigs__length_23770:3088...3976
NR annotation: MYC64727.1, threonine--tRNA ligase [Acidobacteriia bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A1ARE5	Threonine--tRNA ligase OS=Pelobacter propionicus (strain DSM 2379 / NBRC 103807 / OttBd1) OX=338966 GN=thrS PE=3 SV=1
Q3JC02	Threonine--tRNA ligase OS=Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / JCM 30415 / NCIMB 11848 / C-107) OX=323261 GN=thrS PE=3 SV=1
B5EBX9	Threonine--tRNA ligase OS=Citrifermentans bemidjiense (strain ATCC BAA-1014 / DSM 16622 / JCM 12645 / Bem) OX=404380 GN=thrS PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07973	tRNA_SAD	Threonyl and Alanyl tRNA synthetase second additional domain	Domain	Interproscan
PF02824	TGS	TGS domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012947	Domain	Threonyl/alanyl tRNA synthetase, SAD	Interproscan
IPR004095	Domain	TGS	Interproscan
IPR045864	Homologous_superfamily	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	Interproscan
IPR012676	Homologous_superfamily	TGS-like	Interproscan
IPR012675	Homologous_superfamily	Beta-grasp domain superfamily	Interproscan
IPR018163	Homologous_superfamily	Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11451	THREONINE-TRNA LIGASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0043039	Biological Process	tRNA aminoacylation	Interproscan
GO:0004829	Molecular Function	threonine-tRNA ligase activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006435	Biological Process	threonyl-tRNA aminoacylation	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15323	TSEN34; tRNA-splicing endonuclease subunit Sen34	EC:4.6.1.16	Transfer RNA biogenesis	ko03016	deepkoala