Gene detail

Detailed information of ANN37798-RA in Montipora grisea

Genomic Location: Scaffold_7875__1_contigs__length_23889:6662...8011
NR annotation: MCH9000620.1, oxygen-independent coproporphyrinogen III oxidase [Pseudomonadota bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O31381	Oxygen-independent coproporphyrinogen III oxidase OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=hemN PE=3 SV=2
Q51676	Oxygen-independent coproporphyrinogen III oxidase OS=Paracoccus denitrificans (strain Pd 1222) OX=318586 GN=hemN PE=3 SV=1
P95651	Oxygen-independent coproporphyrinogen III oxidase OS=Cereibacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) OX=349102 GN=hemN PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06969	HemN_C	HemN C-terminal domain	Domain	Interproscan
PF04055	Radical_SAM	Radical SAM superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010723	Domain	HemN, C-terminal	Interproscan
IPR007197	Domain	Radical SAM	Interproscan
IPR006638	Domain	Elp3/MiaA/NifB-like, radical SAM core domain	Interproscan
IPR004558	Family	Oxygen-independent coproporphyrinogen III oxidase HemN	Interproscan
IPR034505	Family	Anaerobic coproporphyrinogen-III oxidase	Interproscan
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13932	COPROPORPHYRINIGEN III OXIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0051536	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0004109	Molecular Function	coproporphyrinogen oxidase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006779	Biological Process	porphyrin-containing compound biosynthetic process	Interproscan
GO:0006782	Biological Process	protoporphyrinogen IX biosynthetic process	Interproscan
GO:0051539	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan
GO:0051989	Molecular Function	coproporphyrinogen dehydrogenase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02495	hemN, hemZ; oxygen-independent coproporphyrinogen III oxidase	EC:1.3.98.3	Porphyrin metabolism	ko00860	deepkoala