Detailed information of ANN37862-RA in Montipora grisea

Genomic Location: Scaffold_9194__1_contigs__length_20247:1084...2022
NR annotation: HCU88595.1, peptide chain release factor 1 [Gammaproteobacteria bacterium]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B0TX37Peptide chain release factor 1 OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017 / CCUG 19701 / FSC 153 / O#319-036) OX=484022 GN=prfA PE=3 SV=1
B2SFF6Peptide chain release factor 1 OS=Francisella tularensis subsp. mediasiatica (strain FSC147) OX=441952 GN=prfA PE=3 SV=1
A7NE96Peptide chain release factor 1 OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) OX=458234 GN=prfA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002570 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03462
all species →		PCRFPCRF domainDomainInterproscan
PF00472
all species →		RF-1RF-1 domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050057
all species →		FamilyProkaryotic/Mitochondrial Release FactorInterproscan
IPR005139
all species →		DomainPeptide chain release factorInterproscan
IPR000352
all species →		DomainPeptide chain release factor class IInterproscan
IPR045853
all species →		Homologous_superfamilyPeptide chain release factor class I superfamilyInterproscan
IPR004373
all species →		FamilyPeptide chain release factor 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43804
all species →		LD18447PInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006415
all species →		Biological Processtranslational terminationInterproscan
GO:0003747
all species →		Molecular Functiontranslation release factor activityInterproscan
GO:0016149
all species →		Molecular Functiontranslation release factor activity, codon specificInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02835prfA, MTRF1, MRF1; peptide chain release factor 1-Translation factorsko03012deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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