Gene detail

Detailed information of ANN38071-RA in Montipora grisea

Genomic Location: Scaffold_2443__1_contigs__length_42712:29707...31201
NR annotation: UCH26588.1, MAG: glycine betaine/L-proline ABC transporter ATP-binding protein [Trueperaceae bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
E0SCY1	Glycine betaine/choline transport system ATP-binding protein OusV OS=Dickeya dadantii (strain 3937) OX=198628 GN=ousV PE=1 SV=1
P17328	Glycine betaine/proline betaine transport system ATP-binding protein ProV OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=proV PE=2 SV=2
P46920	Glycine betaine transport ATP-binding protein OpuAA OS=Bacillus subtilis (strain 168) OX=224308 GN=opuAA PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006817 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00005 all species →	ABC_tran	ABC transporter	Domain	Interproscan
PF00571 all species →	CBS	CBS domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003439 all species →	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR046342 all species →	Homologous_superfamily	CBS domain superfamily	Interproscan
IPR051921 all species →	Family	ABC transporter osmolyte uptake ATP-binding protein	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR005892 all species →	Family	Glycine betaine/proline betaine transport system ATP-binding protein ProV-like	Interproscan
IPR017871 all species →	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR000644 all species →	Domain	CBS domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43869 all species →	GLYCINE BETAINE/PROLINE BETAINE TRANSPORT SYSTEM ATP-BINDING PROTEIN PROV	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0031460 all species →	Biological Process	glycine betaine transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02000	proV; glycine betaine/proline transport system ATP-binding protein	EC:7.6.2.9	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.