Gene detail

Detailed information of ANN38153-RA in Montipora grisea

Genomic Location: Scaffold_4963__1_contigs__length_30665:18930...21254
NR annotation: WP_166167331.1, arginine--tRNA ligase [Pseudomaricurvus alcaniphilus]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN38153-RA

ATGAATGCCAAAGCTGGTAAAACCCGATACCGCCCCCCAAAACACACCGGCTGGCACCCCCGGAGGTTTGGCCTCGCTAGAGCCCGGTCGCAGCCAGTGGTTCAAACAAAACGCGATGGCGATCAATCCGATCAGCAGTCGGATGGCGTCATCAGACAAGCGATGAAACGCCAACGCACCGATGACAATTCCGCCAATGGCACCCGGCAACACAATGCGAATATTGGCTTTGCTCCAGGTGCCGCGAAAGCTCCACAACGCCACCATATCCATCGCCACCAACAGCGGCAGCAGCACTGCCGCCGCCTGAACCGGGGGTACCGCCAAGGTCATCAGCGGCACCGCCACCACCGATACGGCGCCCCCCAGCCCGCCCTTGGCCATGCCGTAGAGCAACACCGCCGGAATGGCGCAGAGGTAGAAAAAAGGGTCTGTGATCATGGGCGCAGCATAAGTGACACGACTGTCGCCGTAAACCACAAAGCGGCCAACCCGCTAAAATCGCGCCCTCATACAGAAGAGCACCGCAGTAACGCTATGAACCTCCGCGACTTTCTATCCGATCACGTTCACTCCGCCATGCAAGCCGCCGGCATTCCCGCCGAGTTCGGCCCGCATATCGCCCCGGCCAAGAACCCGAAATTCGGCGATTATCAGGCCAATGGCGCCATGGCTGCGGCCAAGGCCATGAAAACCAAACCCCGTGATCTGGCGGAATCGATCATCGAACACCTGTCGCTGGATGGCATCGCCGACAACCTAGAAATCGCAGGCCCCGGTTTTATCAACATCACGCTCAATAACGCCTGGCTGGCGCAACACCTGTCGCAGCGCATCACTCAGCCCGAGCGCATGATCGATAAAGCAGAGAAACCACAGATTGTGGTGATCGACTACTCCTCGCCCAATCTGGCCAAAGAGATGCACGTGGGCCACCTGCGCTCCACCATCATTGGTGACTCATTGGCCCGAGTTTTGGCGTTTCAGGGGCACGACGTGATTCGCCAGAACCACGTGGGTGACTGGGGCACGCAATTTGGCATGCTGATCGCTGAGCTGGAGGAACAACTGGACGACGGCGACGTGGCCGACTTCGCACTCAAAGACCTCGAAGCCTTCTACCAACAAGCCAAAAAACACTTCGATGAAGACAAAGACTTTGCCAATCGCGCCCGCGACTACGTGGTAAAACTGCAATCGGGCGACGAACGCATCCTGCTGCTGTGGGAGCAATTCAAAAAAGTCTCCCTCAAACACTGCAGCGACATCTACGAACAACTGAACGTCACCCTCACCGACCTCGACGTGCGTGGCGAAAGCTACTACAACGACGACCTGCCGAGAGTGGTGGCCGATCTGCAATCGCAAGGCCTCGCCCAAGAAGATCAGGGCGCGCAAGTGGTGTTTCTGGAAGAACTGGCCGACAAAGAAGGCAACCCCAGTGTCGTCATCATCCAGAAAAAAGACGGTGGCTACCTCTACGCCACCAGCGATCTGGCCGCCCTGCGCTATCGCGCCAACGTACTCAAGGCCGAGCGCATTTTATACTTTATTGATGCCCGCCAATCACTGCACATGCAACAAGTATTTACCCTCAGCCGCAAAGCCGGGTTTATCGACGATCAGGTGTCGCCCGAACACCACGCCTTCGGCACCATGATGGGCGCCGACGGCAAACCGTTCAAAACCCGCAGTGGCGGCACGGTCAAGCTGGCCGAACTGCTGCGCGAAGCAGTCGAGCGCGCCGCCACCATCATCGCCATGAAAGACCCGGATTTAACCGAAGAAGAAAAAGTCGAAGTGGCAGAGAAAGTGGGCATTGGCGCGGTCAAATACGCGGATCTGTCAAAAACCCGCACCAACGACTATGTGTTCAACTGGGACGCCATGCTCAGCTTTGAGGGCAACACCGCCCCCTATCTGCAATACGCCTACACCCGCATTCGCAGCGTGTTTCGCAACGCCGGTATCGATCAGCCCCAAGGCACCATCACCCTCGGAGAAGACGCCGAGCGCGCACTGGCCCTGAAACTGATGCAATTTGCTGAAATGCTCGATCAAGTGGCTCGCGAAGCCCTGCCGCACGTGCTGTGCACCTATCTGTACGACATCGCCAGCGCGTTTATGCGGTTTTACGAAGCCTGCCCCATCCTCAAACCCGAGGTGGAGCCTGCAACCCGCGACAGTCGACTGGCACTGGCGTGGGTAACTGCCGACACCCTGCGCACCGGGCTGGATTTGTTGGGTATTGAGACCATGGAGAAGATGTAA

Transcript

ANN38153-RA

Protein

Uniprot

Uniprot term	Description
C5BNG6	Arginine--tRNA ligase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) OX=377629 GN=argS PE=3 SV=1
Q21I40	Arginine--tRNA ligase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) OX=203122 GN=argS PE=3 SV=1
B3PKE3	Arginine--tRNA ligase OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=argS PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00750	tRNA-synt_1d	tRNA synthetases class I (R)	Family	Interproscan
PF05746	DALR_1	DALR anticodon binding domain	Domain	Interproscan
PF03485	Arg_tRNA_synt_N	Arginyl tRNA synthetase N terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035684	Domain	Arginyl-tRNA synthetase, catalytic core domain	Interproscan
IPR008909	Domain	DALR anticodon binding	Interproscan
IPR001278	Family	Arginine-tRNA ligase	Interproscan
IPR036695	Homologous_superfamily	Arginyl tRNA synthetase N-terminal domain superfamily	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR009080	Homologous_superfamily	Aminoacyl-tRNA synthetase, class Ia, anticodon-binding	Interproscan
IPR005148	Domain	Arginyl tRNA synthetase N-terminal domain	Interproscan
IPR001412	Conserved_site	Aminoacyl-tRNA synthetase, class I, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11956	ARGINYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004814	Molecular Function	arginine-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006420	Biological Process	arginyl-tRNA aminoacylation	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0006418	Biological Process	tRNA aminoacylation for protein translation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01887	RARS, argS; arginyl-tRNA synthetase	EC:6.1.1.19	Mitochondrial biogenesis	ko03029	deepkoala