Gene detail

Detailed information of ANN38189-RA in Montipora grisea

Genomic Location: Scaffold_2902__1_contigs__length_39321:25684...26613
NR annotation: NBB82444.1, hydroxymethylbilane synthase [Alphaproteobacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q6H6D2	Porphobilinogen deaminase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=HEMC PE=2 SV=1
Q43082	Porphobilinogen deaminase, chloroplastic OS=Pisum sativum OX=3888 GN=HEMC PE=1 SV=1
Q43316	Porphobilinogen deaminase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HEMC PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03900	Porphobil_deamC	Porphobilinogen deaminase, C-terminal domain	Domain	Interproscan
PF01379	Porphobil_deam	Porphobilinogen deaminase, dipyromethane cofactor binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036803	Homologous_superfamily	Porphobilinogen deaminase, C-terminal domain superfamily	Interproscan
IPR000860	Family	Porphobilinogen deaminase	Interproscan
IPR022419	Binding_site	Porphobilinogen deaminase, dipyrromethane cofactor binding site	Interproscan
IPR022418	Domain	Porphobilinogen deaminase, C-terminal	Interproscan
IPR022417	Domain	Porphobilinogen deaminase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11557	PORPHOBILINOGEN DEAMINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004418	Molecular Function	hydroxymethylbilane synthase activity	Interproscan
GO:0033014	Biological Process	tetrapyrrole biosynthetic process	Interproscan
GO:0018160	Biological Process	peptidyl-pyrromethane cofactor linkage	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006783	Biological Process	heme biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01749	hemC, HMBS; hydroxymethylbilane synthase	EC:2.5.1.61	Porphyrin metabolism	ko00860	deepkoala