Gene detail

Detailed information of ANN38238-RA in Montipora grisea

Genomic Location: Scaffold_5647__1_contigs__length_28915:8410...10113
NR annotation: WP_016939276.1, MULTISPECIES: AAA family ATPase [Nitrosopumilus]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
F2Z6D2	Cell division protein C OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) OX=330779 GN=cdvC PE=1 SV=1
Q09803	Suppressor protein of bem1/bed5 double mutants OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vps4 PE=3 SV=1
O16299	Fidgetin-like protein 1 OS=Caenorhabditis elegans OX=6239 GN=figl-1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09336	Vps4_C	Vps4 C terminal oligomerisation domain	Domain	Interproscan
PF04212	MIT	MIT (microtubule interacting and transport) domain	Domain	Interproscan
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR015415	Domain	Spastin/Vps4, C-terminal	Interproscan
IPR007330	Domain	MIT domain	Interproscan
IPR036181	Homologous_superfamily	MIT domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR050304	Family	Microtubule-severing AAA ATPase	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23074	AAA DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0140603	Molecular Function	obsolete ATP hydrolysis activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12196	VPS4; vacuolar protein-sorting-associated protein 4	-	DNA repair and recombination proteins	ko03400	deepkoala