Detailed information of ANN38287-RA in Montipora grisea

Genomic Location: Scaffold_4275__1_contigs__length_32828:18457...19671
NR annotation: NNG02578.1, type I DNA topoisomerase [Inquilinus sp.]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q1RIM1DNA topoisomerase 1 OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=topA PE=3 SV=1
Q9X3X7DNA topoisomerase 1 OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) OX=264203 GN=topA PE=3 SV=3
Q68X45DNA topoisomerase 1 OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257363 GN=topA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0012429 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01131
all species →		Topoisom_bacDNA topoisomeraseFamilyInterproscan
PF13368
all species →		Toprim_C_rptTopoisomerase C-terminal repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000380
all species →		FamilyDNA topoisomerase, type IAInterproscan
IPR013824
all species →		Homologous_superfamilyDNA topoisomerase, type IA, central region, subdomain 1Interproscan
IPR023405
all species →		Homologous_superfamilyDNA topoisomerase, type IA, core domainInterproscan
IPR013497
all species →		DomainDNA topoisomerase, type IA, centralInterproscan
IPR025589
all species →		RepeatTopoisomerase C-terminal repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42785
all species →		DNA TOPOISOMERASE, TYPE IA, COREInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0003917
all species →		Molecular FunctionDNA topoisomerase type I (single strand cut, ATP-independent) activityInterproscan
GO:0006265
all species →		Biological ProcessDNA topological changeInterproscan
GO:0003916
all species →		Molecular FunctionDNA topoisomerase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN38287-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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