Gene detail

Detailed information of ANN38337-RA in Montipora grisea

Genomic Location: Scaffold_2022__1_contigs__length_46803:22784...24526
NR annotation: MCG8420044.1, sigma-54 dependent transcriptional regulator [Pseudomonadota bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q6D8R9	Anaerobic nitric oxide reductase transcription regulator NorR OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=norR PE=3 SV=1
Q7MFY9	Anaerobic nitric oxide reductase transcription regulator NorR OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=norR PE=3 SV=1
Q8D4F9	Anaerobic nitric oxide reductase transcription regulator NorR OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=norR PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00158	Sigma54_activat	Sigma-54 interaction domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR025944	Conserved_site	Sigma-54 interaction domain, conserved site	Interproscan
IPR002078	Domain	RNA polymerase sigma factor 54 interaction domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR025662	Binding_site	Sigma-54 interaction domain, ATP-binding site 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32071	TRANSCRIPTIONAL REGULATORY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan