Detailed information of ANN38409-RA in Montipora grisea

Genomic Location: Scaffold_7108__1_contigs__length_25617:16864...19413
NR annotation: TVR31469.1, ATP-dependent RNA helicase [Spirochaetaceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O51767ATP-dependent RNA helicase HrpA OS=Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31) OX=224326 GN=hrpA PE=1 SV=1
P43329ATP-dependent RNA helicase HrpA OS=Escherichia coli (strain K12) OX=83333 GN=hrpA PE=1 SV=3
Q03319Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prh1 PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21010HA2_CHelicase associated domain (HA2), ratchet-likeDomainInterproscan
PF07717OB_NTP_bindOligonucleotide/oligosaccharide-binding (OB)-foldDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF04408HA2_NHelicase associated domain (HA2), winged-helixDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007502DomainHelicase-associated domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR011709DomainDEAD-box helicase, OB foldInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR048333DomainHelicase associated domain (HA2), winged-helix domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18934ATP-DEPENDENT RNA HELICASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan

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