Genomic Location: Scaffold_8282__1_contigs__length_22952:7822...9162
NR annotation: MYC83785.1, response regulator [Acidobacteriota bacterium]
Species Montipora grisea · all data for this species · gene families
| CDS |
| ANN38489-RA |
| Transcript |
| ANN38489-RA |
| Protein |
| ANN38489-RA |
| UniProt accession | Description |
|---|---|
| Q04848 | DNA-binding transcriptional regulator NtrC OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 / NCIMB 13405 / ORS 571) OX=438753 GN=ntrC PE=3 SV=2 |
| P10576 | DNA-binding transcriptional regulator NtrC OS=Bradyrhizobium sp. (strain RP501 Parasponia) OX=378 GN=ntrC PE=3 SV=1 |
| P10577 | DNA-binding transcriptional regulator NtrC OS=Rhizobium meliloti (strain 1021) OX=266834 GN=ntrC PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006593 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00158 all species → | Sigma54_activat | Sigma-54 interaction domain | Domain | Interproscan |
| PF08448 all species → | PAS_4 | PAS fold | Domain | Interproscan |
| PF00072 all species → | Response_reg | Response regulator receiver domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002078 all species → | Domain | RNA polymerase sigma factor 54 interaction domain | Interproscan |
| IPR025662 all species → | Binding_site | Sigma-54 interaction domain, ATP-binding site 1 | Interproscan |
| IPR013656 all species → | Domain | PAS fold-4 | Interproscan |
| IPR000014 all species → | Domain | PAS domain | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR001789 all species → | Domain | Signal transduction response regulator, receiver domain | Interproscan |
| IPR011006 all species → | Homologous_superfamily | CheY-like superfamily | Interproscan |
| IPR035965 all species → | Homologous_superfamily | PAS domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR32071 all species → | TRANSCRIPTIONAL REGULATORY PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0006355 all species → | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0008134 all species → | Molecular Function | transcription factor binding | Interproscan |
| GO:0000160 all species → | Biological Process | phosphorelay signal transduction system | Interproscan |
ANN38489-RA.
