Detailed information of ANN38596-RA in Montipora grisea

Genomic Location: Scaffold_2117__1_contigs__length_45678:4177...5417
NR annotation: MCE2500667.1, type IIA DNA topoisomerase subunit B [Dehalococcoidia bacterium]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P05652DNA gyrase subunit B OS=Bacillus subtilis (strain 168) OX=224308 GN=gyrB PE=3 SV=1
O50627DNA gyrase subunit B OS=Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=gyrB PE=3 SV=1
P94604DNA gyrase subunit B OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W) OX=272562 GN=gyrB PE=3 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00986
all species →		DNA_gyraseB_CDNA gyrase B subunit, carboxyl terminusFamilyInterproscan
PF00204
all species →		DNA_gyraseBDNA gyrase BDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014721
all species →		Homologous_superfamilySmall ribosomal subunit protein uS5 domain 2-type fold, subgroupInterproscan
IPR000565
all species →		FamilyDNA topoisomerase, type IIA, subunit BInterproscan
IPR001241
all species →		FamilyDNA topoisomerase, type IIAInterproscan
IPR013760
all species →		Homologous_superfamilyDNA topoisomerase, type IIA-like domain superfamilyInterproscan
IPR002288
all species →		DomainDNA gyrase B subunit, C-terminalInterproscan
IPR020568
all species →		Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR013506
all species →		DomainDNA topoisomerase, type IIA, subunit B, domain 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45866
all species →		DNA GYRASE/TOPOISOMERASE SUBUNIT BInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0003918
all species →		Molecular FunctionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006265
all species →		Biological ProcessDNA topological changeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN38596-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP