Gene detail

Detailed information of ANN38655-RA in Montipora grisea

Genomic Location: Scaffold_5866__1_contigs__length_28382:21316...22269
NR annotation: WP_276603141.1, sigma 54-interacting transcriptional regulator [Nannocystis pusilla]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O87455	Regulatory protein LuxO OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=luxO PE=1 SV=2
P41789	DNA-binding transcriptional regulator NtrC OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=glnG PE=1 SV=2
Q3K999	Sigma54-dependent transcriptional regulator SfnR OS=Pseudomonas fluorescens (strain Pf0-1) OX=205922 GN=sfnR PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00158	Sigma54_activat	Sigma-54 interaction domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025943	Binding_site	Sigma-54 interaction domain, ATP-binding site 2	Interproscan
IPR025662	Binding_site	Sigma-54 interaction domain, ATP-binding site 1	Interproscan
IPR025944	Conserved_site	Sigma-54 interaction domain, conserved site	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR002078	Domain	RNA polymerase sigma factor 54 interaction domain	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32071	TRANSCRIPTIONAL REGULATORY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan