Gene detail

Detailed information of ANN38691-RA in Montipora grisea

Genomic Location: Scaffold_534__1_contigs__length_88026:701...1990
NR annotation: MCG8360141.1, sigma-54 dependent transcriptional regulator [Kiloniellales bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q06065	Regulatory protein AtoC OS=Escherichia coli (strain K12) OX=83333 GN=atoC PE=1 SV=2
Q9KT84	Regulatory protein LuxO OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=luxO PE=1 SV=1
Q8CWJ5	Regulatory protein LuxO OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=luxO PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00158	Sigma54_activat	Sigma-54 interaction domain	Domain	Interproscan
PF02954	HTH_8	Bacterial regulatory protein, Fis family	Domain	Interproscan
PF00072	Response_reg	Response regulator receiver domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002078	Domain	RNA polymerase sigma factor 54 interaction domain	Interproscan
IPR001789	Domain	Signal transduction response regulator, receiver domain	Interproscan
IPR002197	Domain	DNA binding HTH domain, Fis-type	Interproscan
IPR025944	Conserved_site	Sigma-54 interaction domain, conserved site	Interproscan
IPR011006	Homologous_superfamily	CheY-like superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32071	TRANSCRIPTIONAL REGULATORY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan
GO:0000160	Biological Process	phosphorelay signal transduction system	Interproscan
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan