Gene detail

Detailed information of ANN38696-RA in Montipora grisea

Genomic Location: Scaffold_9460__1_contigs__length_18997:1124...2602
NR annotation: WP_223117771.1, carboxyl transferase domain-containing protein [Ruegeria sp. SCSIO 43209]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
I6YDK7	Biotin-dependent 3-methylcrotonyl-coenzyme A carboxylase beta1 subunit OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=accD1 PE=1 SV=1
Q3ULD5	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Mus musculus OX=10090 GN=Mccc2 PE=1 SV=1
Q5XIT9	Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001327 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01039 all species →	Carboxyl_trans	Carboxyl transferase domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045190 all species →	Family	Methylcrotonoyl-CoA carboxylase beta chain MCCB/AccD1-like	Interproscan
IPR011762 all species →	Domain	Acetyl-coenzyme A carboxyltransferase, N-terminal	Interproscan
IPR034733 all species →	Domain	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	Interproscan
IPR029045 all species →	Homologous_superfamily	ClpP/crotonase-like domain superfamily	Interproscan
IPR011763 all species →	Domain	Acetyl-coenzyme A carboxyltransferase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22855 all species →	ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004485 all species →	Molecular Function	methylcrotonoyl-CoA carboxylase activity	Interproscan
GO:0006552 all species →	Biological Process	L-leucine catabolic process	Interproscan
GO:1905202 all species →	Cellular Component	methylcrotonoyl-CoA carboxylase complex	Interproscan
GO:0016874 all species →	Molecular Function	ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01969	MCCC2, accD1; 3-methylcrotonyl-CoA carboxylase beta subunit	EC:6.4.1.4	Valine, leucine and isoleucine degradation	ko00280	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.