Genomic Location: Scaffold_1936__1_contigs__length_47779:31074...32165
NR annotation: MXW82385.1, serine--tRNA ligase [Rhodothermaceae bacterium]
| CDS | |||||
| ANN38771-RA | |||||
| Transcript |
| ANN38771-RA |
| Protein |
| ANN38771-RA |
| Uniprot term | Description |
|---|---|
| Q2S1G4 | Serine--tRNA ligase OS=Salinibacter ruber (strain DSM 13855 / M31) OX=309807 GN=serS PE=3 SV=1 |
| Q3A8Q5 | Serine--tRNA ligase OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) OX=246194 GN=serS PE=3 SV=1 |
| Q6MRK1 | Serine--tRNA ligase OS=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIMB 9529 / HD100) OX=264462 GN=serS PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00587 | tRNA-synt_2b | tRNA synthetase class II core domain (G, H, P, S and T) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002317 | Family | Serine-tRNA ligase, type1 | Interproscan |
| IPR045864 | Homologous_superfamily | Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) | Interproscan |
| IPR006195 | Domain | Aminoacyl-tRNA synthetase, class II | Interproscan |
| IPR033729 | Domain | Serine-tRNA ligase catalytic core domain | Interproscan |
| IPR002314 | Domain | Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) | Interproscan |
| IPR010978 | Homologous_superfamily | Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43697 | SERYL-TRNA SYNTHETASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000166 | Molecular Function | nucleotide binding | Interproscan |
| GO:0004828 | Molecular Function | serine-tRNA ligase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0006434 | Biological Process | seryl-tRNA aminoacylation | Interproscan |
| GO:0004812 | Molecular Function | aminoacyl-tRNA ligase activity | Interproscan |
| GO:0006418 | Biological Process | tRNA aminoacylation for protein translation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K01875 | SARS, serS; seryl-tRNA synthetase | EC:6.1.1.11 | Transfer RNA biogenesis | ko03016 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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