Gene detail

Detailed information of ANN38795-RA in Montipora grisea

Genomic Location: Scaffold_9350__1_contigs__length_19586:414...2693
NR annotation: WP_275821835.1, NADP-dependent malic enzyme [Fodinicurvata sp. CAU 1616]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN38795-RA

ATGGAGATGGAGAGCCGTAAACGCTACACACCGGACGAGGCGCTGAACTTCCACAGCCGCGGACGTCCGGGCAAACTGGAAATCACCGCGACCAAGCCGGTGGCCACCCAGCGCGATCTCTCGCTGGCCTATTCGCCGGGCGTCGCGATCCCCTGCGAGGAGATCTACAAGGACCCCTCTACGGCCTACGACTACACCGCCAAGGGCAATCTGGTGGCCGTGATCTCCAACGGCACGGCGGTCCTGGGCTTGGGCAATCTGGGCGCACTCGCCTCCAAGCCCGTGATGGAGGGCAAGGCGGTGCTCTTCAAGCGCTTCGCCGACGTCGACGGCTTCGACCTGGAGGTCTCGACGGAGGATGTCGATGAGTTCGTCAACTGTGTGCGCTACCTCGGCGCCTCCTTCGGGGGCATCAACCTAGAGGACATCAAGGCGCCGGAGTGCTTCATCATCGAACAGCGCCTGCAAGAGCTGCTGGACATCCCGGTTTTCCACGACGATCAGCACGGCACGGCCATCATCGCCACCGCTGGCATTCTCAACGCCCTGCACCTGACCGGACGGGATCTCAAGACGACGAAGATGGTCGTCAATGGCGCCGGTGCCGCGGGCATCGCCTGCGTCGAGCTGCTGAAGGCCATGGGCATGCCTCACAACAACGTCATCCTCTGCGACACCAAGGGGGTGATCTACCAAGGCCGCGAGGTCGGCATGAACCAGTGGAAGTCGGCCCACGCCGCCCAGACCGAGGCGCGCAGCCTGGAAGAGGCCATGGTCGGCGCCGATGTCTTCTTCGGCCTCTCGGCCAAGGGCGCGGTGACCAAGAAGATGGTGCTGGAGATGGCCGACCAGCCGGTGATCTTCGCCATGGCCAATCCCGATCCCGAGATCACGCCCGAGGAGGTGGCCGAGGTGCGTGACGACGCCATCATGGCGACCGGCCGTTCCGACTATCCCAATCAGGTCAACAACGTGTTGGGCTTTCCCTATATCTTCCGCGGCGCCCTGGATGTGCGCGCCAGCTCCATCAACATGGAGATGAAGATCGCCGCCGCCAAAGCCCTGGCCGAGCTGGCCCGCGAGGACGTGCCCGACGAGGTCGACCGCGCCTACGCCGGCCGCCGCCTGCGCTATGGACCGGACTACATCATCCCAGCACCCTTCGACCCGCGCCTGATTGTCGAGATCCCGAAGGCCGTCGCCAAGGCCGCGATCGATACTGGCGTGGCCGGCAAGAAAATCGAGGATTGGGAAAGCTATGAGCAACAGCTGGAGGCGCGTCTCGACCCAACGGCGGCGACCCTGCAGTCGATCTTCGAAACCGTGCGCGACCATCCGCAGCGCGTGGTCTTCGCCGAGGGCGAGGAGGAGAAGATCCTACGCGCGGCCTACGCCTACCATTCCCAGGGCTTTGGCACGCCGATCCTGATCGCCCGCGAGGAACGCTTCAAGGAAAAGGCCAAGGCGCTCGGCCTGCCCGACGACTTCGCCCAGGTGGTCAATTCCGCAACCGGCTCCCTGCGCGAACGTTACGGGGAGTTCCTCTACAACCGCCTGAAGCGCAAGGGCTTCCTCTTCCGTGATGTCCAGCGCATGGTGAACCAGAACCGTAATGTCTTCGCAGCCTGCATGGTGGCCTGCGGCGAGGCCGACGGCATGGTCACGGGCCTGACCCGCAACTTCAACGTCGCCTACGACGACATCCGCCGGGTGCTGGATCCTAAGGCCGGCAAGCGCTCCTTCGCCTTTTCCATCATGGTCCACCGGGGCCGCTCGGTCTTCCTGGCGGATACCTCGGTGCACGAGCTGCCCAGTCCGGACCAGCTGGCTGACTTCGCCGAGCAGATGGCCGCCCAGGTGCGCGCCATGGGCCATGAGCCGCGCGTGGCGTTGCTGTCCTTTTCCAACTTCGGCAATCCGCCGCGCGAGCGCGCCATGCGCATCCGACAGGCGGTCGAGGTGCTGGACAGCCGCCAGATCGACTTCGAATACGATGGCGAGATGTCGGCCAACGTCGCGCTCAACTACGAGCTGATGCGCGAGCTCTATCCCTTCTGCCGCTTAACCGGTCCGGCCAATGTCCTGATCATGCCCGCGCTGCACGCCGCCAACATTTCCACCCGCATGGTGGCGGAGCTGGGCATGGCCCAGGTGATCGGCCCGCTGGTCACGGGGCTGGACCGGCCAGCTCAGATCGTTCAGCTCGGCGCCACGGCTCATGACATCGTCAATGCCGCGGCCATCGCCGGTTACTCCGCCATCAACGATCACTTGTTCTGA

Transcript

ANN38795-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O30808	NADP-dependent malic enzyme OS=Rhizobium meliloti (strain 1021) OX=266834 GN=tme PE=1 SV=2
Q9ZDF6	Probable NADP-dependent malic enzyme OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=RP373 PE=3 SV=1
Q9ZFV8	NADP-dependent malic enzyme OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=maeB PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0012840 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00390 all species →	malic	Malic enzyme, N-terminal domain	Domain	Interproscan
PF03949 all species →	Malic_M	Malic enzyme, NAD binding domain	Domain	Interproscan
PF01515 all species →	PTA_PTB	Phosphate acetyl/butaryl transferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045213 all species →	Domain	Malic enzyme, NAD-binding domain, bacterial type	Interproscan
IPR012302 all species →	Domain	Malic enzyme, NAD-binding	Interproscan
IPR042112 all species →	Homologous_superfamily	Phosphate acetyltransferase, domain 2	Interproscan
IPR015884 all species →	Conserved_site	Malic enzyme, conserved site	Interproscan
IPR012301 all species →	Domain	Malic enzyme, N-terminal domain	Interproscan
IPR051674 all species →	Family	Malate Decarboxylating Enzymes	Interproscan
IPR012188 all species →	Family	NAD(P)-dependent malic enzyme	Interproscan
IPR042113 all species →	Homologous_superfamily	Phosphate acetyltransferase, domain 1	Interproscan
IPR002505 all species →	Domain	Phosphate acetyl/butaryl transferase	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR037062 all species →	Homologous_superfamily	Malic enzyme, N-terminal domain superfamily	Interproscan
IPR046346 all species →	Homologous_superfamily	Aminoacid dehydrogenase-like, N-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43237 all species →	NADP-DEPENDENT MALIC ENZYME	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0051287 all species →	Molecular Function	NAD binding	Interproscan
GO:0004470 all species →	Molecular Function	malic enzyme activity	Interproscan
GO:0016616 all species →	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0006108 all species →	Biological Process	malate metabolic process	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0016746 all species →	Molecular Function	acyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00029	maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)	EC:1.1.1.40	PPAR signaling pathway	ko03320	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.