Gene detail

Detailed information of ANN38797-RA in Montipora grisea

Genomic Location: Scaffold_3947__1_contigs__length_33914:20841...24317
NR annotation: MXZ24429.1, CTP synthase [Caldilineaceae bacterium SB0665_bin_21]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN38797-RA

ATGGCCGTAATAGCTATAGTTGGCACCGGTTACGTAGGTCTGGTTACCGGTGCCTGCTTTGCCGATCTGGGTAACCAGGTGCGTTGCATTGATGTGGATGCCGCCAAGATTGCCCAGCTGCAAGAGGGACGCGTTCCCATCTATGAACCCGGCTTGCAGGAGATCGTACAACGCAATCAGACCGCTGGCCGGCTTTCCTTTCATGCGGACTATGCCACGGCCCTGACGGCGGCCGAGTTCGTGTTTGTCTGTGTGGATACACCGGCGGATACCCATGGCCACCCGGACATGCGGAGAGTGGAAAACGCTTTGGCCAGCATAAGGGACCATGTAGAGACTGGTGCGATATTGGTCAACAAGAGCACGGTGCCGGTCGGTACGGGCGATTGGGTGGAAAGCCTGCTGGAGACCGCGACCGGCAATGGCCCCAGGATGGACGTAGTGAGTTGTCCTGAATTTCTGCGGGAAGGATCAGCGGTACAGGACTTCATGCATCCCGATCGCATTGTGCTGGGTTGTCTGGAACCGGAACCGGCGGCGAAGCTGGTGGAATTGTACCGTCCGATGGAGGCAGAGGTGGTGATCACCGACCTGCGCACCGCCGAAATGATCAAGTACGCCAGCAATGCTTACCTGGCGACCCGCATCAGTTTCGTCAATCACATGGCTCGCTTGTGCGAGGCCGTAGGGGTTGATGTCGGTGTGGTTACGCGGGGCATGTCCCTGGATCGCCGGATTGGCAACCAGTTCTTGAGTGCAGGGCTGGGATTCGGGGGCAGTTGCTTTCCCAAGGATGTCAGTGCGCTGAATCAGCTGGCCCGCTCGTATGCAGTGGATGCCTCGTTCTTGGAAACCGTCCTCCATGTGAATCAGGCATCCCAGAACTGGGTGATCAACCAGTTGCAGGAGATTTTGGGCCCGGATCTGGCGGATTGTACGTTGGGCTTCCTGGGCTTGGCCTTCAAACCCGGCACGGATGATCTGCGCGAAGCGCCTGCCATGGCGATCATCGCCAGGCTCCAGGCGCAGGGAGCCCGTATCAAGGCGTACGATCCGGCGGCTATGGCCAAGGCACGGGTCCAGAATACCCGCATAGTCACGGTGGAAGACCCCTACGCATTGGCCAAGGAAGCAGACGGTCTGGTGGTGTGTACGGAGTGGAATGAATTCCAGCACCTGGACATGCTGCGCCTGGCCTCCTGTATGCGGCGGCGCGTGCTCATTGACGGTCGCAATATTTACGATCCAGTGACCATGCAGGCGTTGGGCTTCATCTATCGGGGTGTGGGCAGAGGCCATGTCCTGACCACAGTGGAAGGCGGTCTGGAGAGACCCTGGGATAGCGGATACAGAATGCAGGAGCCAGGGAAAAGGGGAGTAACAGGCGTGTCAAAGTTAACATCAGGCGTGTCGAAATTCATCTTTGTCACCGGTGGGGTGGTGTCTGGCATCGGCAAGGGTGTGGTGGCGGCCTCCATCGGCGTATTGATGAAGGCCCGGGGCTTGAGTGTGGCCGCGCTGAAACTGGATCCCTACCTCAACGTCGATCCGGGGACCATGTCGCCCTACCAACACGGGGAAGTCTTTGTCACGGCTGACGGGGCCGAAACAGATTTGGACCTGGGTCATTACGAACGGTTCATTGGCAACGATCTGTCGACGCTCAGCAGCGTCACCAGTGGCCAGATTTATGCCAATCTGCTCAACGAGGAACGACTGGGCGACAAGTACCTGGGCGGGACGATCCAGGTTGTGCCCCATGTAACCAATCAAATCAAGGAAAGTATCTACAAGTCGGTGGAGCACAGTCATCCCGATGTGGTTTTGGTGGAAATTGGGGGTACCGTTGGGGATATTGAAGGTTTGCCCTTTCTGGAAGCCATTCGCCAGTTGTACAGTGAAATCGGACCCTCCAATTCTCTGTACGTGCATGTCACTCTGTTGCCTTTCCTCCAGTCTTCCAAGGAATTGAAAACCAAGCCGACCCAGCACAGTGTCCGCGTCCTCCGCAGCAACGGTCAGCCGCCGGATGTTATCGTCTTGCGCAGTGATTACCCCATTCAGCCGGAAATCCTGGACAAAGTGGCCCGGCATTGTGATGTGACCCGGAACGCCGTCATCCCGCTGGAAACTTCGCAAACCCATTATTCCGTGCCCCTGGCGCTGGAAGACTCCGGCATGGGGCGGTGGATGGAGGATCATTTCCGCCTGCGCTCCATTCAGTCGCCGGGCGTTGAACTGACCCGCCTGCAGGAGTATGTCCAGACCTACACGACGGTTACGGAGTCGATTGCCGTGGGCCTGGTCGGCAAGTACATCTCCCTGGAAGACGCCTACATGAGTGTCAAGGAGTCGCTGGTGCATGCCGCCGTGGCCCTGGAAAGGCAACTGGATCTGCGCTGGATCGACTCCGAGTTGCTGGAACACGGGGATCCCGAACCCTATCTCGCAGATCTGGAGGCCATTGTGGTACCCGGCGGTTTTGGCCAACGGGGGGTGGAAGGCAAAATCCAGGCGGCTGCCTATGCACGTCAGCACCAGGTGCCCTTCCTCGGCCTGTGTCTGGGTATGCAAGTGATGTGCATCGAAGTCGCTCGTTCGGTCGCGCAGCTCAGGGAGGCCAACAGCACGGAATTCGATATGCACACGCCGCATCCCGTCATTGACCTGATGCCCGATCAGCGGGAGGTGGCGGAACTGGGTGGTACCATGCGTCGCGGCAGCTATCCCTGCGTATTGCAGGCGGATTCCCGGGCCCTCCGGGCTTACCGGACTCTGGGATACAGTGACACTGTCCATGAGCGGCATCGCCATCGGTATGAATTCAATAACGAGTACCGCGACATCCTGGCCCAGCATGGACTTCGCTATACCGGCCTTTCCCCCGATGACCGATTGGTCGAGATTGCGGAGCTGGAGGCGCATCCCTTTATGGTCGGGTGCCAATTCCATCCGGAATTCCAGAGTCGGCCGACGCAGCCGCATCCTCTATTTCTGGGTTTCATAGAAGCGGCCGTCCAGGCCTCCACGCAAAGTGTCCAGATGTTTGTGTCCTCTGGATCCCTGCCCGTAGTTCCGGAGGAAGTGGAAACCCTGACCTGA

Transcript

ANN38797-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3Z6N1	CTP synthase OS=Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195) OX=243164 GN=pyrG PE=3 SV=1
A5FPS8	CTP synthase OS=Dehalococcoides mccartyi (strain ATCC BAA-2100 / JCM 16839 / KCTC 5957 / BAV1) OX=216389 GN=pyrG PE=3 SV=1
Q3ZYU1	CTP synthase OS=Dehalococcoides mccartyi (strain CBDB1) OX=255470 GN=pyrG PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002829 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00984 all species →	UDPG_MGDP_dh	UDP-glucose/GDP-mannose dehydrogenase family, central domain	Domain	Interproscan
PF03720 all species →	UDPG_MGDP_dh_C	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain	Domain	Interproscan
PF03721 all species →	UDPG_MGDP_dh_N	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain	Domain	Interproscan
PF06418 all species →	CTP_synth_N	CTP synthase N-terminus	Domain	Interproscan
PF00117 all species →	GATase	Glutamine amidotransferase class-I	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004468 all species →	Family	CTP synthase	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR008927 all species →	Homologous_superfamily	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily	Interproscan
IPR014026 all species →	Domain	UDP-glucose/GDP-mannose dehydrogenase, dimerisation	Interproscan
IPR014027 all species →	Domain	UDP-glucose/GDP-mannose dehydrogenase, C-terminal	Interproscan
IPR001732 all species →	Domain	UDP-glucose/GDP-mannose dehydrogenase, N-terminal	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR017456 all species →	Domain	CTP synthase, N-terminal	Interproscan
IPR036220 all species →	Homologous_superfamily	UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily	Interproscan
IPR017476 all species →	Family	UDP-glucose/GDP-mannose dehydrogenase	Interproscan
IPR028357 all species →	Family	UDP-glucose 6-dehydrogenase, bacterial type	Interproscan
IPR033828 all species →	Domain	CTP synthase GATase domain	Interproscan
IPR029062 all species →	Homologous_superfamily	Class I glutamine amidotransferase-like	Interproscan
IPR017926 all species →	Domain	Glutamine amidotransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11550 all species →	CTP SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003883 all species →	Molecular Function	CTP synthase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006221 all species →	Biological Process	pyrimidine nucleotide biosynthetic process	Interproscan
GO:0006241 all species →	Biological Process	CTP biosynthetic process	Interproscan
GO:0019856 all species →	Biological Process	pyrimidine nucleobase biosynthetic process	Interproscan
GO:0042802 all species →	Molecular Function	identical protein binding	Interproscan
GO:0016616 all species →	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0051287 all species →	Molecular Function	NAD binding	Interproscan
GO:0000271 all species →	Biological Process	polysaccharide biosynthetic process	Interproscan
GO:0003979 all species →	Molecular Function	UDP-glucose 6-dehydrogenase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN38797-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.