Gene detail

Detailed information of ANN38940-RA in Montipora grisea

Genomic Location: Scaffold_1178__1_contigs__length_60113:29271...31721
NR annotation: WP_049588217.1, heavy metal translocating P-type ATPase [Alteromonas macleodii]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN38940-RA

ATGGCAAGGCACGACTGTTACCATTGCGGCTTGCCTATAGCGAGTTCAGACAATGGGAAATTTACTACTGTCATTTTAGGGCAACAACGAGACATGTGTTGCCCTGGCTGCTTAGCGGTAGCTGAAGCGATCGTTAACAACGGCCTTGAGGACTATTACCAGTTTAGAACCGAACCGGCGCAAAAATCTGACGATGGTATTTTAGAAACATTAGACAAGCTAAAAGTATATGACGACCCTTCCCTTCAAGAAGAGTTCGTGTTTGAAGAAGGTCAGGACAAACAGATTCAATTGACCCTTGAAGGTATTACGTGCGCTGCGTGTGGCTGGCTTATCGAAAAGCAGTTGTCGAAAGTAGAAGGAATAAAGCAAGTCGCGGTGAATGTACAAGAGCGCCGAGCACTGGTTACCTGGTCACCTTTTCAAATCAAACTTAGTCAAATTCTATCTACGCTAAAACGCATTGGTTACGTTGGCTCGCCATTTCACCCCGACGAACACGAAGCCAGCTATAAGCGCGAACAAAAAACCTTTCTTAAAAAGCTTGGCCTAGCAGGCATTATGACCATGCAGGTAATGATGCTGATGACGGGGCTTTATTTTGATTGGTTTGGCGCCATTGAGTTAGAGACCCGCCAATATTTTTATTGGGTTGCCCTTACACTTACTACACCTGTGGTGCTGTATTCAGGCAGCAACTTTTATATGGGCGCCGCTAAAGCGCTAAGCGCCAAAACGGTTAATATGGACGTACCCGTTACGCTCGCAATATTCGGTACTTACATTGCTGGAATTCGTTCTACAGTATTAGAGCAAGGTGAAGTGTATTTCGAATCCATTTGTATGTTTATTTTTCTGCTGTTACTTAGCCGATTCTTAGAACATCGCAGCCGTCATCGCGCCGCACAGATCTCTGCCAATATGATGCAGTATGTGCCCGTATCAGCGACTAAACTAAATCCGGATGGTAGCCTAACCGAGTGTCTGGCTAAGCAGCTAAAAATTGACGACGTAGTGCTAGTGAAGCCTGGTGAAACAGTCCCCATTGATGGGGTGGTAACCGACGGCAACGCAGCGGTTGACGAATCTATGCTTACCGGCGAGTTTAATCCCGTGCGTAAGTCCAACAGTAGCCCAGTTTACGGCGGCACGGTTTGTCAAGATGGTACGCTAACCATTACGGTTACGCAGACCCTTAAAAATGCGCTGGTAAATCAAATTGTAAGACTGCAAGCAAGTGCCATGGCGAGTAAACCTAAAGCAGCGCAGATAGCCGATAATTTTTCTCGCTATTTCGTTACCGCGGTATTGCTGATTTCGGCGTTAACCTATGGCTTTTGGGCGTATCAGGGTAGCGACGAGGCATTTTGGATCACCATATCGGTGCTGGTTGCAACCTGCCCTTGCGCACTAGGGTTGGCCACGCCATCAGCGTTAACCTGCGCTATGGCAAAATTAAACAGACAAGGTATTTTACTAAAACGGGCAGATGCGCTTGAACAAATTACTGACATTGACACCATCGCTCTAGACAAAACCGGCACGCTCACAAAAGGCAAATTTACTATTTCAAATGCCTGGTACGCTGACGGCGTGGATAGTAATAGTGCGCTATCAATTGCGCGCGCTTTGGAGTCACGCTCTGAACATCCGATTGCCAAAGCCTTTAGCGACGGTATAGCCTTTAGCGAGAATTCTGCCTCTAGCGGCAGTGCTAACGTTATCGATAGCACTGTACACAAAGTGACTAATTTTACCGTTACGCCAGGAGGTGGTATCAGCGGTGAGATCAATGACACGTTGTTTTCTATGGGTTCTGCAGCATTCAGCGTTCACGAATCTCAGCTAAAACTCATTGAAGCGTTCCCTTCAGCTAACGTGTTTCTCACGGTTAAGGGGCGTATTATGGCGGCGTATGAAGTAAAGGATTCACTAAGAGAAGATACGCAAGAAACTCTCGATATATTAGCTGCAAGCCATACCCTCGCCGTTTTAAGTGGTGATACACAGCAAAACGTTAATGCGCTTACCGCACCATTGCCAATTTCGACCGCTAAAGGTGGCCTAACACCTGAGCAAAAGTACGAAGCCGTTCAAGCTATGCAGCAATCTGGCGCGAAAGTGATGATGATGGGTGACGGTATTAACGACGCTCCAGTTCTTGCCAGTGCTGATGTGGCAATTGCAGTGGGTAATGCCACAGACGTGGCTAAAACTGCCGCCGACGTGATACTGCTTGGCGATCAGCTGCTTTCTGTACCAGAACTTATTCGAACTGCGCACCAAGTGAAGCAAAAAATAAGGCAAAATATTGGCTGGTCGGTAGGTTACAACGTTTTGATCTTACCTTTCGCCGTATCAGGCCTACTTTCACCGTGGATGGCTGTTGTTGGTATGTCGTTAAGCAGTATCATTGTGGTCACAAACTCAACGCGACTCTTGAGCAAATAG

Transcript

ANN38940-RA

Protein

Uniprot

Uniprot term	Description
O33533	Nitrogen fixation protein FixI OS=Rhizobium leguminosarum bv. viciae OX=387 GN=fixI PE=3 SV=1
Q4L970	Copper-exporting P-type ATPase OS=Staphylococcus haemolyticus (strain JCSC1435) OX=279808 GN=copA PE=3 SV=1
Q5HL56	Copper-exporting P-type ATPase OS=Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A) OX=176279 GN=copA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00702	Hydrolase	haloacid dehalogenase-like hydrolase	Domain	Interproscan
PF12156	ATPase-cat_bd	Putative metal-binding domain of cation transport ATPase	Family	Interproscan
PF00403	HMA	Heavy-metal-associated domain	Domain	Interproscan
PF00122	E1-E2_ATPase	E1-E2 ATPase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023214	Homologous_superfamily	HAD superfamily	Interproscan
IPR036163	Homologous_superfamily	Heavy metal-associated domain superfamily	Interproscan
IPR018303	PTM	P-type ATPase, phosphorylation site	Interproscan
IPR008250	Homologous_superfamily	P-type ATPase, A domain superfamily	Interproscan
IPR027256	Family	P-type ATPase, subfamily IB	Interproscan
IPR036412	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR023299	Homologous_superfamily	P-type ATPase, cytoplasmic domain N	Interproscan
IPR023298	Homologous_superfamily	P-type ATPase, transmembrane domain superfamily	Interproscan
IPR006121	Domain	Heavy metal-associated domain, HMA	Interproscan
IPR021993	Domain	Putative metal-binding domain of cation transport ATPase	Interproscan
IPR001757	Family	P-type ATPase	Interproscan
IPR044492	Domain	P-type ATPase, haloacid dehalogenase domain	Interproscan
IPR017969	Conserved_site	Heavy-metal-associated, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43520	ATP7, ISOFORM B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005507	Molecular Function	copper ion binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0043682	Molecular Function	P-type divalent copper transporter activity	Interproscan
GO:0055070	Biological Process	copper ion homeostasis	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0006812	Biological Process	monoatomic cation transport	Interproscan
GO:0019829	Molecular Function	ATPase-coupled monoatomic cation transmembrane transporter activity	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0005215	Molecular Function	transporter activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01533	copB; P-type Cu2+ transporter	EC:7.2.2.9	Enzymes with EC numbers	-	deepkoala