Gene detail

Detailed information of ANN39000-RA in Montipora grisea

Genomic Location: Scaffold_9192__1_contigs__length_20251:9422...11752
NR annotation: QMU62342.1, ribonucleoside-diphosphate reductase subunit alpha [Gammaproteobacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN39000-RA

ATGAAAGACACGTCGCCTGATCTGATCGTCGAGGGAACTTTGCGTAACGTATTCAACGATATGCACGAACGTGACGTCGGCACCGCTTTGATCATGAGCGCACGCACCTTGATCGAAAAAGAACCGAATTATTCCTACGTGTCGGCGCGCCTGTTGCTCGACAAGTTACGGCGTGAAGCGCTGTCGTTCGTCACCGGGCGTTTCGACGAGGCGACGTTTGCCGAGATGGAGACTCGTTACGCCGATTACTTCGCGCAATACGTCCGCAAAGCGGTCGATCTCGGACTGCTGGCGCCCGTCCTCGCCGAGGAATACGATCTGGCGAGGTTGGCGGAAAGCCTCGAGCCCGGACGCGATCGGCAATTCACCTACCTTGGATTGCAGACTTTATATGATCGTTATTTCATCCATTCCAGGCATCGTCGTTTCGAGTTGCCGCAGGCGTTTTTCATGCGCGTGGCGATGGGGTTGGCGATGCATGAAATCGATCGGGAAGGGCGCGCGATTGAGTTTTACGAATTGCTGTCGTCCTTCGATTTTATGAGCTCGACGCCCACCTTGTTCAACTCCGGCACTTTGCGGCCGCAGCTGTCGTCGTGTTATCTGACCACCGTGCCCGACGATCTGCACGGCATTTTCGAAGCCATCCAGGACAACGCGATGCTGTCCAAGTTCGCCGGCGGTCTCGGCAACAGCTGGACTCGGGTAAGGGCGATGAAGTCTCACATCGAGGGTACGAATGGTGAATCGCAGGGTATCGTGCCGTTTCTCAAAGTGGCCAACGACACCGCCGTGGCCGTCAATCAGGGCGGCAAACGCAAAGGTGCGGTATGCGCCTATCTGGAGACCTGGCATCTCGACGTCGAGGAGTTTCTGGAGCTGCGCAAGAACACCGGTGACGATCGGCGCCGTACCCACGACATGAACACCGCGAACTGGGTCCCCGATCTGTTCATGAAGCGTCTGGTCAACGACGAGGAATGGACTTTATTTTCGCCGAGCGAGACGCGCGACCTGCCCGATCTGTACGGCGCGGAATTCGACAAACGTTACGTCGAATACGAAGCGCGGGCCGACCGCGGCGAGATCAACAACTACAAGCGCGTCAAGGCCAAAGACCTGTGGCGCAAGATGCTGAACATGCTCTACGAGACCGGCCATCCGTGGATCACGTTCAAAGACCCCTGCAACCTGCGTTCTCCGCAACAGCACTGCGGCGTCGTGCGTTCGTCGAACCTGTGCACCGAGATCACCTTGAATACTTCGGACGAGGAAATCGCGGTATGCAACCTGGGGTCAGTCAACCTCGCCAACCACGTCGACGAACGCGGACTGATGCCGCGCAAACTGGAGAAGACCATCACCACCGCGATGCGGATGCTCGACAACGTGATCGACTACAACTACTACAGCGTCGCCAAAGCGCGCGCGTCTAACATGCGTCATCGCCCGGTGGGGCTCGGCGTCATGGGTTTTCAGGACGCCCTGCACAAGTTGCGCTTGTCCTACGCCGACGACAAGGCCATCGAGTTCAGCGACCGCTCGATGGAGATGGTGAGCTATTTTGCCATCAAGGCGTCTTCTGATCTGGCTCGTGAGCGCGGCGTTTATGCCTCGTATTCGGGGTCTTTGTGGAGCCGCGGCATCCTGCCGATAGACTCCGTGCGGTTGCTCGCCGATCAGCGCGGCGACTATCTCAAGCTGGACGATAGCCGCGAACTCGATTGGGGTAAGTTGCGCGAGCGCGTCAAACGGCAGGGTATGCGCAATTCGAACACGCTGGCGATCGCGCCGACGGCGACGATCTCGAACGTCTGCGGCGTCACGCAAAGTATCGAGCCGACGTATCAGAACCTGTTCGTCAAGTCTAATTTGTCCGGTGAGTTTACCGTCATCAATCCCTACCTGGTGGCGGATCTGAAAAAACTCGATATCTGGGATGAAGTAATGGTCAACGACCTCAAGTACTACGACGGCAAGCTGGCCAAGATCAACCGCATCCCCAACGAGTTGAAAGAACTCTATCTGACCGCGTTTGAAATCGACCCGCAGCGGCTGGTGGAAGCGGCCGCGCGGCGCCAGAAATGGATCGATCAGTCGCAGTCGCTGAATCTCTACATGAGCGAAAGCTCGGGAAAGAAAATGGATGCTCTCTATAAACTCGCGTGGCTCAGGGGTTTGAAGACCACTTATTATCTGCGCTCACTCGGGGCCACCCACGTGGAAAAGAGCACCCTCGAGAAACAGGACGGTAATCTGAACGCCGTCGAAGTTAATCCTCGCACCACCCCGTGTTTGATCACGGATCCGACGTGCGAAGCGTGTCAATGA

Transcript

ANN39000-RA

Protein

Uniprot

Uniprot term	Description
Q9PL93	Ribonucleoside-diphosphate reductase subunit alpha OS=Chlamydia muridarum (strain MoPn / Nigg) OX=243161 GN=nrdA PE=3 SV=1
O84834	Ribonucleoside-diphosphate reductase subunit alpha OS=Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx) OX=272561 GN=nrdA PE=3 SV=2
Q9Z6S5	Ribonucleoside-diphosphate reductase subunit alpha OS=Chlamydia pneumoniae OX=83558 GN=nrdA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00317	Ribonuc_red_lgN	Ribonucleotide reductase, all-alpha domain	Domain	Interproscan
PF02867	Ribonuc_red_lgC	Ribonucleotide reductase, barrel domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013509	Domain	Ribonucleotide reductase large subunit, N-terminal	Interproscan
IPR005144	Domain	ATP-cone domain	Interproscan
IPR000788	Domain	Ribonucleotide reductase large subunit, C-terminal	Interproscan
IPR013346	Domain	Ribonucleotide reductase, class I, alpha subunit, C-terminal	Interproscan
IPR039718	Family	Ribonucleoside-diphosphate reductase large subunit	Interproscan
IPR008926	Homologous_superfamily	Ribonucleotide reductase R1 subunit, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11573	RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004748	Molecular Function	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0009263	Biological Process	deoxyribonucleotide biosynthetic process	Interproscan
GO:0005971	Cellular Component	ribonucleoside-diphosphate reductase complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00525	E1.17.4.1A, nrdA, nrdE; ribonucleoside-diphosphate reductase alpha chain	EC:1.17.4.1	DNA repair and recombination proteins	ko03400	deepkoala