Gene detail

Detailed information of ANN39092-RA in Montipora grisea

Genomic Location: Scaffold_1939__1_contigs__length_47757:7760...8694
NR annotation: MYE27645.1, ATP-binding cassette domain-containing protein [Chloroflexota bacterium]
Species abbreviation MGRIS · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P42065	Oligopeptide transport ATP-binding protein AppF OS=Bacillus subtilis (strain 168) OX=224308 GN=appF PE=3 SV=2
Q53194	Probable peptide ABC transporter ATP-binding protein y4tS OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a01400 PE=3 SV=1
C0SP98	Putative oligopeptide transport ATP-binding protein YkfD OS=Bacillus subtilis (strain 168) OX=224308 GN=ykfD PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0023285 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00005 all species →	ABC_tran	ABC transporter	Domain	Interproscan
PF08352 all species →	oligo_HPY	Oligopeptide/dipeptide transporter, C-terminal region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003439 all species →	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR050319 all species →	Family	ABC Transporter ATP-Binding	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR013563 all species →	Domain	Oligopeptide/dipeptide ABC transporter, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43776 all species →	TRANSPORT ATP-BINDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0015833 all species →	Biological Process	peptide transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02032	ddpF; peptide/nickel transport system ATP-binding protein	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.