Gene detail

Detailed information of ANN39126-RA in Montipora grisea

Genomic Location: Scaffold_2619__1_contigs__length_41371:36809...39183
NR annotation: MBM4259486.1, CTP synthase [Deltaproteobacteria bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN39126-RA

ATGAATAATGTTGGGAAGGATGGACGAAAAACAAAATTCATTTTCGTCACAGGTGGAGTGGTGTCCTCGCTTGGCAAGGGGCTCGCCGCAGCGTCTATTGGCGGCCTGCTGGAAAGCCGCGGTCTGACTGTCACCATGCTCAAAATGGACCCGTATATCAACGTCGATCCAGGCACGATGAACCCCTTCCAGCACGGGGAAGTCTTTGTCACTGACGACGGGGCTGAGACTGACCTCGATCTCGGTCACTATGAGCGCTATGTCTCGACCCGGATGACGCGTAAGAACAGCTTCACCACCGGTCAAGTCTATGATGCTGTGATTGCTCGCGAACGCCAGGGCGACTACTTGGGCGGCACAGTCCAGGTTATTCCGCATATTACTGACGAGATTAAGCGGCGTATCCTGACCGCGGCAGACGGCTTTGATGTCGCTATCTGCGAGGTTGGCGGAACGGTCGGCGATATCGAGAGCCTGCCCTTTCTTGAGGCAATTCGTCAGTTTCGCTGGGACTGGGGTAAGGAGCACGTCTTATATATCCACCTGACGCTCGTACCTTTTATCTCTGCCGCCGGGGAACTCAAGACCAAGCCAACCCAACACAGCGTCAAAGACCTGACCAGTTTGGGCATCCAGCCCGACCTGCTGCTGTGCCGCACGGACCGTTATCTGGAACCGAACGTCAAAGCCAAAATCGCCCTGTTCTGTAATGTAGACGAAAGCGCGGTGATTACGGCGAAAGATGTGGAATGTATCTACGAAGTGCCCCTGGTCTTTCACCAAGAGGGCCTTGATGAGCGGATCGTGGAGAAGCTCAATATGTGGACGGGCTCACCCAATCTGAGCCGCTGGGAAACCATTGTTCAGACGTTTCGTAACCCCTGCGACCACATCAGCATTGCGATGGTTGGGAAGTATGTTGAACTCGTAGACTCGTATAAGAGTATCAACGAGGCGCTCGCCCACGGGGGTTTTGCCAATAACTGTCGCGTCGATATCGTCCATATCGACTCGGAACAGCTCGAAAACGATATCTTCCCAGAATCCCTGCAGCAGGCCGATGGCATTCTTGTGCCCATGGGCTTTGGGCGGCGAGGGGCGGAGGGGAAAATTGCCGCGATTCGGTACGCCAGGGAGAACCATATTCCCTTTTTAGGGATTTGTTTTGGTATGCAGATGGCGGTGGTCGAATTCGCCCGGCATGCGTGTAGCCTTGAGGAAGCGAATTCGACCGAAGTCGACGACACAACGCCCGCTCCGGTTATTGCGCTTATGGATGAGCAACGGGAGATCGTTGAGAAAGGCGGGACCATGCGGCTCGGTGCCTATCCCTGTGTGCTGGCTGATCAGAGCCTGGCTCTGAGCCTGTACACACAAAAAGAAATTGCCGAACGCCATCGCCATCGTTATGAGTTCAACAATGCGTATCGCGAACTCTTCGCTTCCAAGGGCATGATTTTTAGCGGTCTCTCTCCTGACGGCGCTTTGGTCGAGGCAATCGAGTTACGCGCTCATCCCTGGTTCGTCGGGGTGCAGTTTCATCCGGAGTTCATCTCCCGTCCGTTTGAATGCCACCCTCTGTTCAGCGGAGAGCACTCTCCGCCAAGAGTGTCCGTTGGTTCGCTCACATTTGGCGGCGGTACCCCCTTTGTGCTGATTGCCGGCCCGTGTGTGATTGAGGACCGGGACTCGGCGCTGCGGCATGCGGAAGCACTCCGTTCGTTAACCGCACGCTTACACGTCCCATTTATTTATAAATCTTCATACGATAAGGCAAATCGTTCCTCCCACGCCTCTTTCCGCGGGCTTGGCATAGAGGAGGGGCTGAATATCCTTGCTGAGGTCAAACGCGAGCTGGGCGTGCCGCTCTTGACGGATGTGCATACACCCCAGGAGGTTACGGATACGGCAGAGGTCGTTGATATTCTCCAGATTCCCGCCTTTTTATGTCGTCAGACCGATTTACTTCTGGCGGCGGGCCACAGTCAGCGGACTGTGAATATCAAGAAAGGTCAGTTCCTCGCCCCGTCCGACATGGAATATGTCGCCCAAAAAATCGCTTCGACCGGCAACCGGCGTATTCTTCTGACGGAACGGGGAGCTTCTTTTGGATACCATAATCTTGTGTCTGACATGCGCTCACTACCCATCCTCGCCCGTTACGGCTATCCGGTTGTGTATGATGCAACTCATAGCGTTCAACTACCGGGAGGACAGGGCACAATGTCCCGGAGGTCAGCGGGAATTTATCCCACCGCTGGCCCGGGCGGCAGTGACGGTAGGGGTTGA

Transcript

ANN39126-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3A371	CTP synthase OS=Syntrophotalea carbinolica (strain DSM 2380 / NBRC 103641 / GraBd1) OX=338963 GN=pyrG PE=3 SV=1
Q2LRK2	CTP synthase OS=Syntrophus aciditrophicus (strain SB) OX=56780 GN=pyrG PE=3 SV=1
Q74BY3	CTP synthase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=pyrG PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002829 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06418 all species →	CTP_synth_N	CTP synthase N-terminus	Domain	Interproscan
PF00793 all species →	DAHP_synth_1	DAHP synthetase I family	Domain	Interproscan
PF00117 all species →	GATase	Glutamine amidotransferase class-I	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004468 all species →	Family	CTP synthase	Interproscan
IPR013785 all species →	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR017456 all species →	Domain	CTP synthase, N-terminal	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR006218 all species →	Domain	DAHP synthetase I/KDSA	Interproscan
IPR017926 all species →	Domain	Glutamine amidotransferase	Interproscan
IPR033828 all species →	Domain	CTP synthase GATase domain	Interproscan
IPR029062 all species →	Homologous_superfamily	Class I glutamine amidotransferase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11550 all species →	CTP SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003883 all species →	Molecular Function	CTP synthase activity	Interproscan
GO:0006221 all species →	Biological Process	pyrimidine nucleotide biosynthetic process	Interproscan
GO:0009058 all species →	Biological Process	biosynthetic process	Interproscan
GO:0006241 all species →	Biological Process	CTP biosynthetic process	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0019856 all species →	Biological Process	pyrimidine nucleobase biosynthetic process	Interproscan
GO:0042802 all species →	Molecular Function	identical protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN39126-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.