Gene detail

Detailed information of ANN39220-RA in Montipora grisea

Genomic Location: Scaffold_8919__1_contigs__length_21217:2031...2894
NR annotation: WP_085121726.1, ornithine carbamoyltransferase [Tistlia consotensis]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q07GY2	Ornithine carbamoyltransferase OS=Rhodopseudomonas palustris (strain BisA53) OX=316055 GN=argF PE=3 SV=1
Q89VE8	Ornithine carbamoyltransferase OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=argF PE=3 SV=1
A5VNP2	Ornithine carbamoyltransferase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) OX=444178 GN=argF PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004629 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00185 all species →	OTCace	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain	Domain	Interproscan
PF02729 all species →	OTCace_N	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024904 all species →	Family	Ornithine carbamoyltransferase	Interproscan
IPR006130 all species →	Family	Aspartate/ornithine carbamoyltransferase	Interproscan
IPR002292 all species →	Family	Ornithine/putrescine carbamoyltransferase	Interproscan
IPR006131 all species →	Domain	Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain	Interproscan
IPR006132 all species →	Domain	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding	Interproscan
IPR036901 all species →	Homologous_superfamily	Aspartate/ornithine carbamoyltransferase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45753 all species →	ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004585 all species →	Molecular Function	ornithine carbamoyltransferase activity	Interproscan
GO:0019240 all species →	Biological Process	citrulline biosynthetic process	Interproscan
GO:0042450 all species →	Biological Process	arginine biosynthetic process via ornithine	Interproscan
GO:0006591 all species →	Biological Process	ornithine metabolic process	Interproscan
GO:0006520 all species →	Biological Process	amino acid metabolic process	Interproscan
GO:0016597 all species →	Molecular Function	amino acid binding	Interproscan
GO:0016743 all species →	Molecular Function	carboxyl- or carbamoyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00611	OTC, argF, argI; ornithine carbamoyltransferase	EC:2.1.3.3	Arginine biosynthesis	ko00220	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.