Detailed information of ANN39536-RA in Montipora grisea

Genomic Location: Scaffold_9071__1_contigs__length_20726:941...1987
NR annotation: EAQ95825.1, ribosomal large subunit pseudouridine synthase D [Congregibacter litoralis KT71]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P33640Ribosomal large subunit pseudouridine synthase D OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=rluD PE=3 SV=2
Q8P682Ribosomal large subunit pseudouridine synthase D OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=rluD PE=3 SV=1
Q8PHN2Ribosomal large subunit pseudouridine synthase D OS=Xanthomonas axonopodis pv. citri (strain 306) OX=190486 GN=rluD PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00849PseudoU_synth_2RNA pseudouridylate synthaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006225FamilyPseudouridine synthase, RluC/RluDInterproscan
IPR006224Conserved_sitePseudouridine synthase, RluA-like, conserved siteInterproscan
IPR036986Homologous_superfamilyRNA-binding S4 domain superfamilyInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR006145DomainPseudouridine synthase, RsuA/RluA-likeInterproscan
IPR050188FamilyRluA Pseudouridine SynthaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21600MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06180rluD; 23S rRNA pseudouridine1911/1915/1917 synthaseEC:5.4.99.23
Ribosome biogenesisko03009deepkoala

TOP