Genomic Location: Scaffold_5449__1_contigs__length_29384:22308...24377
NR annotation: RKU18932.1, hypothetical protein C6501_01895, partial [Candidatus Poribacteria bacterium]
| CDS | ||||
| ANN39575-RA | ||||
| Transcript |
| ANN39575-RA |
| Protein |
| ANN39575-RA |
| Uniprot term | Description | |||
|---|---|---|---|---|
| Q9C1X1 | Periodic tryptophan protein 2 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC713.04c PE=1 SV=1 | |||
| Q15269 | Periodic tryptophan protein 2 homolog OS=Homo sapiens OX=9606 GN=PWP2 PE=1 SV=2 | |||
| Q8BU03 | Periodic tryptophan protein 2 homolog OS=Mus musculus OX=10090 GN=Pwp2 PE=1 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| PF00404 | Dockerin_1 | Dockerin type I domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR018247 | Binding_site | EF-Hand 1, calcium-binding site | Interproscan |
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR019775 | Conserved_site | WD40 repeat, conserved site | Interproscan |
| IPR036439 | Homologous_superfamily | Dockerin domain superfamily | Interproscan |
| IPR011047 | Homologous_superfamily | Quinoprotein alcohol dehydrogenase-like superfamily | Interproscan |
| IPR016134 | Domain | Dockerin domain | Interproscan |
| IPR011044 | Homologous_superfamily | Quinoprotein amine dehydrogenase, beta chain-like | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR020472 | Repeat | G-protein beta WD-40 repeat | Interproscan |
| IPR002105 | Repeat | Dockerin type I repeat | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19879 | TRANSCRIPTION INITIATION FACTOR TFIID | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0000272 | Biological Process | polysaccharide catabolic process | Interproscan |
| GO:0004553 | Molecular Function | hydrolase activity, hydrolyzing O-glycosyl compounds | Interproscan |
| GO:0005669 | Cellular Component | transcription factor TFIID complex | Interproscan |
| GO:0006367 | Biological Process | transcription initiation at RNA polymerase II promoter | Interproscan |
| GO:0016251 | Molecular Function | RNA polymerase II general transcription initiation factor activity | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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